Desulfosarcina ovata subsp. sediminis: DSCO28_21060
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Entry
DSCO28_21060 CDS
T06286
Symbol
smc
Name
(GenBank) chromosome partition protein Smc
KO
K03529
chromosome segregation protein
Organism
dov
Desulfosarcina ovata subsp. sediminis
Brite
KEGG Orthology (KO) [BR:
dov00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
dov03036
]
DSCO28_21060 (smc)
Chromosome and associated proteins [BR:
dov03036
]
Prokaryotic type
Chromosome partitioning proteins
Condensin-like complex
DSCO28_21060 (smc)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SMC_N
SMC_hinge
AAA_21
AAA_15
AAA_23
AAA_29
ATG16
Tropomyosin
EzrA
DUF4200
AAA_27
BLOC1_2
ABC_tran
Bap31_Bap29_C
DUF724
Fez1
Motif
Other DBs
NCBI-ProteinID:
BBO81540
UniProt:
A0A5K7ZQ70
LinkDB
All DBs
Position
2286965..2290576
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AA seq
1203 aa
AA seq
DB search
MKLKKLDIVGFKSFCEKASINFPPGICAVVGPNGCGKSNVVDALRWVMGEQSIKQLRGKD
KEDIIFSGANGRPPLNLAEVSLTLVNDNGSMPEEFRDFSEVMVTRRLYRSGETAYLINKQ
PCRLKDIHNIFMGSGAGSRTYAVIQQGNIGAITDAGPNERRVFIEEAAGVTRYKMRKTEA
LRKVDATNQNLLRVKDIITEIDRQMAGLKRQAQKAERFKALKAEARQIDIRLLCHHDTEL
RRRMEALAGMLKSLKDEDIGQNTQLKQIDAAVEAIKLRRFEKDRDIAAQKSRKFEIQRKI
DRMEADLVHLKTDRERLVSEVAELEAARTDLTAKNDDIVSEIDQVQQQHGSLQTQIDNLK
TAIARENADSAALRDQIGSLNRAMETAKSDLMKMVAEEARVKNSHQNASNNRESLKRRLR
RIDEETALAEKTVREATTRRETADAELVQIKNDIRELDDQIAERKQELDRAISGLSAQVK
ATQTLEMERNKAHSSLAALKKMEANLDWYKDGVKTVLKAAREPDSQTGGAPLNGIVGLLA
DVIEPATGWETAVEAALGESLQYILVQDQTAGAAAIDHLQQAQSGRCGFVPVGAIRAIDD
RPEKLPDPEQRLLKHVQVKEGYAPVAGALLGHVAVSDTLADAREIYNRNGRVQTVVTRGG
DLLSHQGVMIGGSPEKLSGILAKKQEIRSLAQTCAQLDSQAEAAHRSQTEMEAHVRDLEK
TLQETISERSHAAQDAMEAEKALYRADEDLKNARRHLDIVRLEQEQLMGEEMDLDEEIER
TNTLLATLARDVSEAQENVARSSARIDETARKMEDFNQRIVDLKLKRTSASANLDNCAST
LRRLKDFQADGIRRLEQLTGDITAKRAKLDGSGKRDEILKRDLDAHYRALKELESRLSED
EKTFSDIDARLKESDARISEIQTQREELHQKIRTLEMDLAEKRIKRENLENRCQEYYHCA
IADLAPPQAAESVEVTEPDAGEMEKQLSAIRQKLSTIGDVNLEAIREYEEQKERFDFLSE
QRDDLVKAIDGLHRVIRKINRITQERFMDTFNKINEKLQEVFPRLFQGGNARLVLTEPDN
PLETGVEFMVSPPGKKLTRMSLLSGGEKALSAISFIFSIFLLKPASFCLMDEIDAPLDDA
NVMRFNNLMKVIGEKSQIIMITHNKSSMEFADTLFGITMEHKGLSKVVSVNLDHDTAKEL
TAA
NT seq
3612 nt
NT seq
+upstream
nt +downstream
nt
atgaaactaaaaaaactggatatcgtcggtttcaagtccttttgcgaaaaagccagcatc
aactttccgccgggcatttgtgcggtggtcggccccaatggttgtggcaaaagcaatgtg
gtcgacgccctgcgctgggtgatgggcgaacagagcatcaagcagctgcgcggcaaggac
aaggaagacatcatcttttccggcgccaacggccggccgccgctgaacctggccgaggtc
tccctgaccctggtcaacgacaacggcagcatgcccgaagagttccgcgatttcagcgag
gtgatggtgacccgccggctctaccgcagcggcgaaaccgcctacctgatcaacaaacag
ccctgccggctcaaggacattcacaatatcttcatgggcagcggggcgggctcgcgcacc
tacgcggtgattcagcagggcaacatcggcgccatcaccgatgccggtccgaacgaacgc
cgggtctttatcgaagaggcggcgggggtaacccgctacaagatgcgcaagaccgaagcc
ctgcgcaaggtggatgccaccaatcagaacctgctgcgggtcaaggatatcatcaccgaa
atcgatcgtcagatggccgggctcaaacgccaggcccagaaagccgaacggttcaaagcc
ctcaaggccgaggcccggcagatcgacatccgactgctctgccaccacgacaccgagctg
cgccgccggatggaggccctggccggcatgctcaaatcactcaaagacgaggacatcggc
cagaacactcagctgaaacagatcgatgcggccgtcgaggccatcaagctgcgccgtttc
gaaaaggaccgtgacatcgccgcgcaaaaatcgcgcaagttcgaaatccagcgcaaaatc
gaccgcatggaggccgacctggtccatctcaaaaccgaccgggaacgactggtgagtgaa
gtggctgaactggaggcggcccgcaccgacctgacggccaagaacgacgacatcgtcagc
gaaatcgaccaggtccagcagcagcacggcagcctgcaaacccaaatcgataacctgaag
accgccattgcccgcgaaaatgccgactcggcggccctgcgcgatcagatcggcagcctg
aaccgggccatggaaacggccaagagcgatttgatgaaaatggtcgccgaagaggcccgg
gtgaaaaacagccaccagaacgcgtccaacaaccgcgaatccctcaaacggcgcctgcgg
cggattgacgaagagaccgccctggcggaaaaaaccgtccgcgaggccaccacccgccgc
gagaccgccgatgccgagctggttcagatcaaaaacgatatcagggagctggacgaccaa
atcgccgagcggaaacaggagctggaccgcgccatcagcggtctctccgcccaggtcaag
gccacccagaccctggagatggaacgtaacaaggcccacagcagtctggcggccctcaaa
aaaatggaagccaacctggactggtacaaggacggggtcaaaacggtgctcaaggccgcc
cgggaacccgattcccagaccggcggcgcccccttgaacggcatcgtcggcctgctggcc
gatgtgatcgaaccggcgaccggctgggagaccgccgtggaagcggccctgggcgaatcc
ctgcagtacatcctggtccaggatcagaccgccggtgcggccgccatcgaccacctgcag
caggcccagtccggccgttgcggttttgttcctgtgggggccatccgagccattgacgat
cgcccggaaaaactgccggatcccgagcagcgcctcctgaagcatgtgcaggtcaaggag
ggctatgcaccggtggccggcgccctgctcggtcatgtggccgtctccgacaccctggcc
gacgcccgtgaaatttataaccgcaacggtcgcgtgcagaccgtggtcacccgtggcggc
gacctgctctcccatcagggggtgatgatcggcggcagcccggaaaaactgtccggcatc
ctggccaagaagcaggaaattcgcagtctggcacaaacctgcgcccaattggacagccag
gccgaggcggcccaccggtcccagacggaaatggaagcgcacgtccgcgaccttgaaaaa
acccttcaggaaaccatcagcgaaaggagccacgccgcccaggatgccatggaggccgaa
aaagccctctaccgcgccgacgaggacttgaaaaacgcccgccgtcatctggatatcgtc
cgcctggagcaggagcagctcatgggtgaggagatggatctggatgaagagatcgagcgc
accaacaccttgctggcgaccctcgcccgcgacgtcagtgaggctcaggaaaatgtggcc
cgcagttcggcacgcatcgatgaaaccgcccgaaagatggaagacttcaaccagcggatc
gtcgacctgaagctaaagcgcacctcggccagtgccaacctggacaattgtgccagcacc
ctgcggcgactgaaggatttccaggctgacggcatccgccggctggaacagctgacgggc
gacatcaccgccaaaagggccaagctggatgggtccggcaaacgcgatgaaatcctcaag
cgcgatctggacgcccactacagggctctgaaggaactggaaagccgactcagcgaggat
gaaaagacctttagcgacatcgacgcccgcctgaaggaaagcgacgcccggatctccgaa
atccagacccagcgcgaggaactgcaccagaaaattcggaccctggagatggacctggct
gaaaagcgcatcaagcgcgagaacctggaaaatcgctgccaggagtactaccattgcgcc
atcgctgacctggcgccgccccaggctgcggaatccgtggaagtgaccgaacccgatgcc
ggcgaaatggaaaaacaactttccgccatccgccagaaactcagcaccatcggagatgtc
aacctggaggcgatccgcgagtacgaggagcagaaggagcgtttcgactttctgagcgag
cagcgcgacgatctggtcaaggccatcgacggcctgcaccgggtgatccgcaagatcaac
cgcatcacccaggagcgcttcatggacaccttcaacaagatcaacgagaaattgcaggag
gtgttcccgcggctcttccagggcggcaatgcccgcctggtgctcaccgagcctgacaat
cccctggagaccggggtggagttcatggtctccccgcccgggaaaaagctgacccgcatg
agccttctgtccggtggcgagaaggccctgtcggcgatcagtttcatcttctccattttt
ctgctcaagccggcatcgttctgtctcatggacgagatcgacgcccccctggatgacgcc
aatgtcatgcgcttcaacaacctgatgaaggtgatcggtgagaagtcccagatcatcatg
atcacccacaacaaaagcagcatggaattcgccgacaccctctttggcatcaccatggaa
cacaaaggcctctccaaggtggtctcggtcaacctggatcatgacacggccaaggaactg
accgccgcataa
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