Desulfosarcina ovata subsp. sediminis: DSCO28_22050
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Entry
DSCO28_22050 CDS
T06286
Name
(GenBank) hypothetical protein
KO
K21470
L,D-transpeptidase YcbB
Organism
dov
Desulfosarcina ovata subsp. sediminis
Brite
KEGG Orthology (KO) [BR:
dov00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
dov01002
]
DSCO28_22050
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
dov01011
]
DSCO28_22050
Peptidases and inhibitors [BR:
dov01002
]
Cysteine peptidases
Family C82
DSCO28_22050
Peptidoglycan biosynthesis and degradation proteins [BR:
dov01011
]
Peptidoglycan biosynthesis and degradation
Transpeptidase
DSCO28_22050
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Paralog
Gene cluster
GFIT
Motif
Pfam:
Scaffold
YkuD
PG_binding_1
Motif
Other DBs
NCBI-ProteinID:
BBO81639
UniProt:
A0A5K7ZPB3
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Position
2398263..2400074
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AA seq
603 aa
AA seq
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MKPVTIISTILIILSLFHLPPVAAAPVQNHLEALLAPMCTGDETPSPLSLQPVARFYQKF
GFQPAWTGPTGPLPRAKQLIAAITGTTAPNLSPEPSPVFRFTPHEVNLNGFSNPLTLEKM
PPRLQMDVMLTDMALRYARRLWRGTVDPETLPGKWLAARRADKRDFPAELAQALKEKRLS
AFMDSLHPQAAAYHHLRQAVQRYEQIQAAGGWPMVPTGETLRRDDTGPRVSALIDRLRAS
GDLSREMTIRQPGAVYDEALEAAVIRFQRRHGLNPDGLVGKTTLAALNVPVGKRITQLQL
NMERWRWFPDSFGQRYLMVNIPAFELNLFEAGLPVQRMRVIVGKNRRPTPIMSSRMTYLE
FNPYWNVPGKIARKDILPKVLKDPTYLSRQGIRVFAGWDRSAPELDPEQIPWQALSGRHF
PYRLRQDPSAINALGQIKFMFPNHESVYIHDTPGKRLFKRDRRNFSSGCVRVEAPITLAG
DLLKHQGWDREQVETAVSDQERKIVPLKQPIPVHLVYFTAWVDNGQAVHFREDVYGRDKR
LQLALTASNANLLHCMADILAAGRLLAASAPGQTVQPASGRCGALVLSVLQQAGEVAGHP
ISF
NT seq
1812 nt
NT seq
+upstream
nt +downstream
nt
atgaagcctgtcacgatcatatcgaccatattgatcatcctctctctctttcatttaccg
ccggtggctgcggcaccggtacaaaaccatctcgaagccctgctggcgcccatgtgtacg
ggtgatgaaacaccatcccccctttcactgcagccggtggcccggttttatcaaaaattc
ggatttcaaccggcctggaccggtcctaccggcccgctgccccgggcgaagcagctgatt
gcggcaatcacaggcacaacagcgccaaacctttcacctgagccatccccggtgtttcgt
ttcaccccccacgaggtcaatctcaacggattttccaacccactgacactggaaaaaatg
cccccccggcttcagatggatgtcatgctcaccgacatggcgttgcgttatgcccggcgc
ctttggcggggaacggtcgatccggaaacgctgcctggaaaatggcttgccgcgcgtcga
gcagacaagcgggattttcccgccgaactggcccaggccctgaaggaaaagcgcttgtcg
gcgttcatggattcactgcatccacaggcagcggcctatcaccacttgaggcaggccgtg
cagcggtacgaacaaatccaggccgccggtggctggccgatggtccctaccggcgaaacc
ctgcgtcgggatgacaccgggccgcgggtctcggcattgatcgatcgtctcagggccagt
ggcgatctctcccgcgagatgaccatccgccagcccggtgccgtttatgacgaggccctg
gaagccgcggtcatccgctttcagcgtcgccatggcttgaatccggatggtctggtcggc
aaaaccacactggccgcgctgaacgttcccgtcgggaaacgaattacccaactgcaactg
aacatggaacgctggcgctggtttccggacagttttggtcagcgctatctgatggtcaac
atccccgcctttgaactcaacctcttcgaagcgggcctgcctgtccagcgtatgcgtgtc
atcgtgggtaagaatcgccggccgacgccgatcatgtccagtcgcatgacctatcttgaa
ttcaacccctattggaatgtccccggcaaaattgcccgcaaggatatcctgcccaaagtc
ctcaaggatccgacctatctcagccgccagggaatccgggtgtttgccgggtgggatcga
tcggcaccggaactggatccggagcaaatcccctggcaggccctgtccggccgccacttc
ccctatcgtttgcggcaggacccctccgcaataaatgcactgggccagatcaaattcatg
tttccgaatcatgagagtgtctatatccacgacaccccggggaaaaggttgttcaagcgg
gaccgtcgcaacttctcatcgggctgtgttcgcgtggaagcgccgatcacactggccggc
gaccttttgaaacatcaggggtgggaccgtgagcaggtggaaacggccgtttccgaccag
gaacgaaagatcgtgcccctgaaacaaccgattccggttcacctggtctattttacggcc
tgggtggataacggtcaggcagtccatttcagggaagatgtctatggccgcgacaagcgg
ctgcagctggcactcacggcgtcaaatgccaatctgctgcattgtatggccgatatcctc
gccgccggccgcctgcttgctgccagcgcgccagggcaaacagtgcaaccggccagtggc
cgatgcggtgctctggttttatcggtcctgcagcaggccggcgaagtggcaggccacccg
atatccttttaa
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