Desulfosarcina ovata subsp. sediminis: DSCO28_22430
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Entry
DSCO28_22430 CDS
T06286
Symbol
dnaX
Name
(GenBank) DNA polymerase III subunit gamma/tau
KO
K02343
DNA polymerase III subunit gamma/tau [EC:
2.7.7.7
]
Organism
dov
Desulfosarcina ovata subsp. sediminis
Pathway
dov03030
DNA replication
dov03430
Mismatch repair
dov03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
dov00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
DSCO28_22430 (dnaX)
03430 Mismatch repair
DSCO28_22430 (dnaX)
03440 Homologous recombination
DSCO28_22430 (dnaX)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
dov03032
]
DSCO28_22430 (dnaX)
03400 DNA repair and recombination proteins [BR:
dov03400
]
DSCO28_22430 (dnaX)
Enzymes [BR:
dov01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
DSCO28_22430 (dnaX)
DNA replication proteins [BR:
dov03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
DSCO28_22430 (dnaX)
DNA repair and recombination proteins [BR:
dov03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
DSCO28_22430 (dnaX)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_delta2
DNA_pol3_gamma3
AAA
DNAX_ATPase_lid
RuvB_N
TIP49
AAA_5
AAA_30
AAA_22
AAA_16
Mg_chelatase
ResIII
AAA_19
nSTAND3
AAA_18
Sigma54_activat
PIF1
TsaE
Rad17
AAA_14
AAA_7
AAA_28
DUF815
RCF1-5-like_lid
DNA_pol3_delta_C
SKI
RNA_helicase
ABC_tran
Zeta_toxin
ORC-CDC6-like
AAA_2
Motif
Other DBs
NCBI-ProteinID:
BBO81677
UniProt:
A0A5K7ZN49
LinkDB
All DBs
Position
complement(2436376..2438070)
Genome browser
AA seq
564 aa
AA seq
DB search
MGYLVLARKYRPQTFDAVVGQQHVTQTLKNAIKAGRVAHAILFSGPRGTGKTTIARILAK
AMNCASGPTDTPCNQCRSCTDITAGRGVDVFEIDGASNNSVEQVRELRDNSRYMPAHSRF
KIYIIDEVHMLSIAAFNALLKTLEEPPAHVMFFFATTEAHKIPITILSRCQRHDLKRIEL
NAVVAHMEALCQQEEVVISSGNLWSIARESGGSMRDALSLLDQILACSDGELDDAYVTNL
LGGMDRSVFFDFSAAVFAGDLSRILAVIDTVYKNGQDLKRFYADLLMHFRHLMLVKMKVR
SEILVDLSPGEIESMAAQVKDVSAALIDQVFTLLFNAEASMRHAFQPRLAMEMVFFKIHQ
IVPALPIDQLIQRMDSLLSDPQLQAVPEAGIVEAQSAYGSAAVAPPSSASPAPAVENPGS
VLPATPVGQEAAADESRPVATDGGDDPWAQVMAAIRDAKPSIAGALSRATRVDVSDKAFT
VVLPDNGFTLNLINKNLEMINAVCREQAAGREIKIEAAGDSAGGKEKAAAKQKNNDIRQQ
LLNHPLVADAVDIFSGKIEEIKIR
NT seq
1695 nt
NT seq
+upstream
nt +downstream
nt
atgggctatcttgttttagcgcgaaaatacagaccccagaccttcgatgcggtggtcggc
cagcagcatgtcacccagaccctgaagaacgccatcaaggccggtcgggtggcccatgcg
atcctgttttccggtccccggggaaccggaaagaccaccatcgcacggattctggccaag
gccatgaattgcgcttcgggtcccaccgatacaccgtgcaaccagtgccgctcctgtacg
gacattaccgccgggcgcggtgtggacgtgttcgaaatcgacggtgcttccaacaacagt
gtcgaacaggtccgtgagcttcgcgacaacagccggtacatgccggcccacagccgtttc
aaaatctatatcatcgatgaagttcacatgctcagcattgccgccttcaatgcgctgctt
aaaacactggaggagccgccggcgcatgtgatgttcttctttgccaccacagaagcgcac
aaaatccccatcacgattctttcgcgctgccagcgccacgatctcaaacggattgaattg
aatgccgtggtggcccacatggaagcgctttgccagcaggaagaggtcgttatctcttcc
ggcaacctgtggagtattgcccgcgaatccggcggcagtatgcgcgacgcactcagcctt
ctggaccagatcctggcctgcagcgacggcgaattggacgatgcctacgtgacgaacctt
ctggggggcatggaccgcagcgtgtttttcgatttttccgcggccgtcttcgccggtgat
ctttctcgcatattggccgtcatcgacacggtttacaaaaatggtcaggatctgaagcgg
ttttatgccgacctgctgatgcatttccgccacctgatgctggtgaaaatgaaggttcga
tcggaaatcctggttgatttgtcacctggagagatcgaatccatggccgctcaggtcaaa
gatgtttccgccgcgctgatcgatcaggtatttactttgttgttcaacgccgaggccagc
atgcggcatgcgtttcagccccgactggccatggagatggtctttttcaagatccaccag
atcgttccggcactgcccatcgatcagctgattcagcgcatggacagccttctgagtgat
ccgcagcttcaggcggtgcccgaggccggtatcgttgaagcccaatccgcttatgggagt
gcggccgtggcgccaccgtcatccgcttccccggccccggcggtggaaaatcccgggtcg
gtgctgccggcaacccctgtcggtcaggaggcggcagccgatgaatcgcgtccagttgca
acggatggcggtgatgatccgtgggcgcaggtcatggcggccattcgagacgccaaaccg
tccatcgccggcgcgctttcccgtgcgacgcgggttgatgtttccgacaaagcgttcacg
gtcgttttgccggataacggttttaccctgaacctgatcaacaagaatctggagatgatc
aacgccgtctgccgggaacaggccgccggacgggagatcaaaatcgaggctgccggggat
tcggccggcggaaaagagaaagcggcggccaaacagaaaaacaatgacatcagacagcag
ttgcttaatcacccgctggtggccgatgctgtcgatattttcagcgggaaaattgaagag
atcaaaatcagatag
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