Desulfosarcina ovata subsp. sediminis: DSCO28_23100
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Entry
DSCO28_23100 CDS
T06286
Symbol
dapF
Name
(GenBank) diaminopimelate epimerase
KO
K01778
diaminopimelate epimerase [EC:
5.1.1.7
]
Organism
dov
Desulfosarcina ovata subsp. sediminis
Pathway
dov00300
Lysine biosynthesis
dov00470
D-Amino acid metabolism
dov01100
Metabolic pathways
dov01110
Biosynthesis of secondary metabolites
dov01120
Microbial metabolism in diverse environments
dov01230
Biosynthesis of amino acids
Module
dov_M00527
Lysine biosynthesis, DAP aminotransferase pathway, aspartate => lysine
Brite
KEGG Orthology (KO) [BR:
dov00001
]
09100 Metabolism
09105 Amino acid metabolism
00300 Lysine biosynthesis
DSCO28_23100 (dapF)
09106 Metabolism of other amino acids
00470 D-Amino acid metabolism
DSCO28_23100 (dapF)
Enzymes [BR:
dov01000
]
5. Isomerases
5.1 Racemases and epimerases
5.1.1 Acting on amino acids and derivatives
5.1.1.7 diaminopimelate epimerase
DSCO28_23100 (dapF)
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Ortholog
Paralog
GFIT
Motif
Pfam:
DAP_epimerase
Motif
Other DBs
NCBI-ProteinID:
BBO81744
UniProt:
A0A5K7ZK36
LinkDB
All DBs
Position
complement(2513323..2514150)
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AA seq
275 aa
AA seq
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MDPIPFFKMSGSGNDFIIIDNREFRVPEARLDELVVGACRRKMAVGADGVILIESSDRVD
FKWRFFNADGSVAEMCGNGARCAARFAFLHGIAGRQMAFDTLAGTIEADVGPRLVKLRMT
DPFDLKTGIELDLDETRVGVGIVNTGVPHAVMMVDDIETVDVIAIGRQIRRHAYFAPAGT
NANFVAVDPAGRIFIRTYERGVEDETLACGTGNVAAALVLARERGLASPVTLTTRSGSDL
IVHFSPRDDDFGDVFLEGDARVIYRGELWEEAWQR
NT seq
828 nt
NT seq
+upstream
nt +downstream
nt
atggacccgatcccttttttcaagatgagcggcagcggcaacgatttcatcatcattgac
aaccgggaattccgggttcccgaggcgcgcctggacgagttggttgtcggggcctgccgc
cggaagatggccgtgggcgcggacggggtgatcctgatcgagtcctcggaccgggtcgat
ttcaagtggcgctttttcaatgccgacggttccgtggccgagatgtgcggcaacggtgcc
cgctgcgcggcccgtttcgccttcctgcacggcattgccggccggcagatggccttcgac
accctggcggggaccatcgaggccgacgtgggcccccgcctggtgaagctgcgcatgacc
gatccctttgacctgaaaaccggcatcgagctggatttggatgaaacccgggttggggtc
ggcatcgtcaacaccggcgtgccccatgcggtgatgatggtggatgatattgaaaccgtg
gatgtgatcgccattggccggcagatccgtcggcatgcctattttgcgccggcgggcacc
aacgccaacttcgtggccgtggatccggccgggcggattttcatccgtacctacgaacgt
ggtgtggaagacgagaccctggcctgcggcacgggcaacgtggcggccgccctggtgctg
gcccgcgaacgggggctggcatcgccggtgaccctgaccacccgcagcggcagcgacctg
atcgtgcatttcagtccccgggatgacgatttcggggatgttttcctggaaggcgatgcg
cgggtgatctatcgcggggagttgtgggaggaagcatggcagcgctga
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