Desulfosarcina ovata subsp. sediminis: DSCO28_25810
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Entry
DSCO28_25810 CDS
T06286
Symbol
recD2
Name
(GenBank) ATP-dependent RecD-like DNA helicase
KO
K03581
exodeoxyribonuclease V alpha subunit [EC:
3.1.11.5
]
Organism
dov
Desulfosarcina ovata subsp. sediminis
Pathway
dov03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
dov00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
DSCO28_25810 (recD2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
dov03400
]
DSCO28_25810 (recD2)
Enzymes [BR:
dov01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.5 exodeoxyribonuclease V
DSCO28_25810 (recD2)
DNA repair and recombination proteins [BR:
dov03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
DSCO28_25810 (recD2)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
AAA_30
AAA_19
HHH_RecD2
OB_YrrC
SH3_13
UvrD_C_2
Viral_helicase1
HHH_5
AAA_11
AAA_28
PIF1
SLFN-g3_helicase
PhoH
HHH
NAT10_TcmA_helicase
AAA_22
MeaB
nSTAND3
AAA_16
HHH_8
NACHT
HHH_2
NTPase_1
AAA
AAA_25
ORC-CDC6-like
TrwB_AAD_bind
AAA_29
RsgA_GTPase
SRP54
ABC_tran
cobW
NPHP3_N
ATPase_2
Zeta_toxin
AAA_5
TsaE
Herpes_Helicase
UvrD-helicase
AAA_23
RecR_HhH
Motif
Other DBs
NCBI-ProteinID:
BBO82015
UniProt:
A0A5K7ZND5
LinkDB
All DBs
Position
2855884..2858070
Genome browser
AA seq
728 aa
AA seq
DB search
MTAAQTIALSGRIERITYHNRDNHFTIARLRTDENHHLITIKGTMPEPKVGESIEVRGRW
EAHARYGQQLCFSTFKPILPATVDGIRNYLASGLIKGVGPKLVERIIGHFKADTLTVIES
APERLCEVAGIGKKTAARIADAWQAHHAARQLMRFLEENGVDVAHTARLLREYGNDAVDI
LCNDPYRVAEDIPRIGFMIADAIVRNADTPVDEADRAKACMLHLFDRAVDQGHAYIDREM
LFDTCLKTFDVAPETAAAALSDLVAGDDLVVATEMAHGGPPPVFLRLLDQAEAMIARRIT
AMQSIPRTEAPPDSRLITDEVLKTLAITLSDRQEEILTRILAHRVSVITGGPGTGKTTLI
RSITAVMERLGHRVMLAAPTGRAARRLSEVTGRPAATLHKTLGYNLADGCFERTEDDPLT
ADVVIVDEASMIDTLLMAHLIRAVPMTASLILVGDVFQLPSVGPGTVLADLIRSEQIVTF
ELTDIFRQAEQSPIVVNAHRIRRGEPPVVAPPDDAEHLSDFYFIEQAAPEKAVQTVVDLC
RQEIPEHFRMDPIRDIQILTPMHRGLVGTLNLNRVLQLALNPDSDQVAVMGNRFHVGDKV
MHLRNNYRKEVFNGDIGILRSIDPEKTRVEVDYDGRIVPYDFVEMDELTLAYAISVHKSQ
GSEYPAVVIPLLTQHYIMLQRNLLYTALTRGKQLVVIVGTTKALRVALGNDRPRQRRSML
ARRLNPQL
NT seq
2187 nt
NT seq
+upstream
nt +downstream
nt
atgaccgctgcccaaaccatcgccctgtccggccgcatcgagcgaatcacctaccacaac
cgtgacaaccacttcaccatcgcccggctgcgtaccgatgagaaccaccatctgatcacc
atcaaagggaccatgccggaacccaaggtgggcgaatcgatcgaggtgcgcggtcgctgg
gaggcccacgcccgctatggccaacagctctgtttctccacgttcaagccgatcctgccg
gcaacggtggacggcatccgcaactacctggcatcgggattgatcaagggcgtgggcccc
aagctggtggaacggatcatcggccacttcaaggccgataccctgacagtcatcgaatcc
gcccccgagcggctctgcgaggtggccggcatcggtaaaaaaaccgccgcccgcattgcc
gatgcctggcaagcccaccacgccgcccgccagctgatgcgctttttggaggaaaatggc
gtagacgtcgcccacaccgcgcggctgctgcgggagtatggcaacgacgccgtcgacatc
ctgtgcaacgacccgtaccgcgtggccgaggatattccgcgcattggtttcatgattgcc
gacgccatcgtgcgcaacgccgacaccccggtggacgaagccgaccgggccaaggcgtgc
atgctgcacctgttcgaccgggccgtggaccaggggcatgcctacatcgaccgggagatg
ctgttcgatacctgcctgaaaacctttgatgtggctccggagaccgctgccgcggccctt
tccgatctggtggccggggacgatctggtcgtggccacggagatggcccacggtggcccg
ccgccggtctttttgcggctgctcgaccaggccgaagcgatgattgcccggcgcatcacg
gccatgcagagcatcccccggacagaggcaccgccggacagccgtttgattaccgacgaa
gtgctcaaaaccctggcgatcaccctgtccgaccgccaggaggagatcctgacccgcatc
ctggcccaccgggtatcggtgatcaccggcggcccgggtaccgggaaaaccacactgatc
cgctcgatcacggcggtcatggaacggctgggacaccgggtgatgctggcggcccccacg
ggccgggccgcccgccgcctgtccgaggtcaccggccggccggcggcgaccctgcacaaa
acactgggctacaatctggcggacggttgtttcgaacgtaccgaagacgatcccttgacc
gccgatgtggtcatcgtcgatgaagcctccatgatcgacaccctgctcatggcccacctg
atccgggccgtaccgatgaccgcatccctcatcctggtgggcgatgtgttccaactgccg
tccgtggggccgggaaccgtgctggcggacctgattcgctcggaacagatcgtcaccttc
gagctgaccgacatctttcgccaggccgaacagagccccatcgtggtcaacgcccaccgg
atccggcggggagagccgcctgtggtggcgccccccgatgatgcggagcacctttcggat
ttttacttcatcgagcaggccgccccggaaaaagcggtgcagacggtcgtggatctttgc
cgccaggagatccccgagcacttccggatggaccccatccgcgacatccagatcctcacc
cccatgcaccgcggcctggtgggcaccctcaatcttaaccgggttctgcagttggccttg
aaccccgacagtgaccaggtagcggtcatgggcaatcgctttcacgtgggcgacaaggtg
atgcacctgcgcaacaactaccgcaaggaggtgttcaacggcgacatcggcatcctgcga
agcatcgatccggagaaaacacgcgtcgaggtggactatgacggacgcatcgtcccctac
gattttgtcgagatggacgagttgaccctggcctatgccatcagcgtgcacaaatcccag
gggtcggaatatccggcggtggtcattccgttgctcacccagcactatatcatgctgcag
cgcaatctgctttataccgccctgacccgcggcaaacagctggtggtcatcgtcggcacg
accaaagcactgagggtggccctgggcaacgaccggccccgccagcgacgctccatgctg
gcccggcgcctgaatccgcaattgtaa
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