KEGG   Desulfosarcina ovata subsp. sediminis: DSCO28_26960
Entry
DSCO28_26960      CDS       T06286                                 
Name
(GenBank) CRISPR-associated helicase/endonuclease Cas3
  KO
K07012  CRISPR-associated endonuclease/helicase Cas3 [EC:3.1.-.- 5.6.2.4]
Organism
dov  Desulfosarcina ovata subsp. sediminis
Brite
KEGG Orthology (KO) [BR:dov00001]
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   02048 Prokaryotic defense system [BR:dov02048]
    DSCO28_26960
Enzymes [BR:dov01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.4  DNA 3'-5' helicase
     DSCO28_26960
Prokaryotic defense system [BR:dov02048]
 CRISPR-Cas system
  Type I CRISPR-Cas system
   Type I signiture cas proteins
    DSCO28_26960
SSDB
Motif
Pfam: Cas3-like_C_2 DEAD ResIII Helicase_C Cas3_HD PhoH AAA_22 DUF1493
Other DBs
NCBI-ProteinID: BBO82130
UniProt: A0A5K7ZQP3
LinkDB
Position
complement(3005718..3008018)
AA seq 766 aa
MVMIQSHQYPYKSLKQHVGEVHKASMAILGSHSEDVRKQVDDCMNYTIQFHDLGKAIPEF
QKYIKNPQQYSNQKKYKAHTPVSLILWLLYAQKNHIPNNIILLVSATVWKHHGDFPSLNT
MLNESLYEYEDDYKISKYPINQVIHELTIELSNPFEADEFDIQNLIDDTFFENWQIEKAA
GYKIKGLLLFSILLEADRTFLALSEYHLKQKLNPMKPITISPEIVDGFLSQKSKSKKQNI
KLNRLRTDLRYAIINDSDDIPNIESVTLPTGLGKTMVAAHWALKHRNQAKIARKVIIVLP
YLSIIDQTVKEYQNLLEKFDPSSLILEAHSIADRKYVEDSNENQNNKFNDAIDFLADTWS
ADFVITTFDQFLYTLLSSKNSHLLRFHNLADALIIIDEIQALPSKLWEPLSVALLAISKT
INSKVLVMSATQPEFLQARELVSSPDIIFNRQCRYQLLLKHISPINLKTFINDCIRRIDD
EDWHLKRVMIVLNTRKSARTVLDSLEGKISCNIFFLSADVTPKERLATILKIKENKPCLV
ITTQCIEAGVDIDMDFAIRDFAPLDSIVQCAGRCNRNGLKNRADIDIVSLTNENGKKYAG
FIYDKTLLEKTSMILTGRSSIHEEDIYQVMKKYFQEIRNSKDTGKIIAGRWAFWRDELNI
KKLLRNESAKYCFIVTSQDQPKNDELPLKDSILSAIKTESIWDRKRKIRSLQSRISELTI
CVWANSNIIPEEIAEPIGCYYLLKDGYYIPGKGINIEDNNVSCKFF
NT seq 2301 nt   +upstreamnt  +downstreamnt
atggttatgattcagtcgcatcaatatccatataagtcattaaaacagcatgtgggggaa
gtccataaagcttcaatggcgattttaggctcccattcagaagatgtaagaaaacaagtc
gatgattgtatgaattacacaattcaatttcacgacttagggaaagctatacccgaattt
caaaagtacataaaaaatcctcagcaatattcaaatcaaaagaagtataaagcgcacacg
ccggtttcattaattttatggcttctgtatgcacaaaaaaatcatatccctaataatatc
attttgcttgtttcagcaactgtttggaaacaccatggcgattttccttcgttaaatacc
atgttaaacgaatccctttatgaatatgaagatgattataaaatttccaaatacccgatc
aatcaggtgatccacgaattaactatcgagctatccaatccctttgaagctgatgaattt
gatatccaaaatttgattgacgatacatttttcgaaaactggcaaattgaaaaagctgcc
ggatataaaattaaagggctcttattgttttcgattttgcttgaagcggatcgaacattt
ttagcattgtcagagtatcacttaaaacaaaaattaaatcccatgaaacctataaccatc
tcaccagagatagtcgacggttttttaagccaaaaatcaaagtctaaaaaacaaaatata
aaattaaatcggctaagaactgatttaagatatgcaattataaatgatagtgatgatatt
ccaaatattgaaagcgttacattacctaccggacttggaaaaacgatggtagctgctcac
tgggcattaaaacatcgcaatcaagcaaagatagcacgaaaagtcattattgttttaccc
tacttatccatcattgatcaaactgtgaaagaatatcaaaatctgcttgaaaaatttgat
cccagctcactaatcttggaagcacactcaattgctgatcgaaagtatgttgaggattca
aatgagaatcaaaataataagtttaatgatgcaatcgattttttggcagatacatggagc
gcggattttgtgatcacaacatttgatcaatttttatatacacttttatcttcgaaaaat
agtcatttattaagatttcataatcttgccgatgcattgataataattgacgaaatacag
gctttgccgagtaaattatgggaaccattatcggtcgccttattagccatttccaaaacg
attaattcaaaagttctcgtcatgtctgcaactcaaccagaatttcttcaggcaagagaa
ctggtatccagtccagatataatatttaaccggcaatgccgttaccaattattattaaaa
cacatctctccgataaatttgaaaacttttattaatgattgcataagaagaattgatgat
gaagattggcacttaaaaagagttatgattgtgctaaacactagaaaatctgccagaact
gtactggattcgctcgaaggtaaaatcagttgtaatatatttttcttgagtgcagatgtg
acgcctaaagaaagattggcaacgattttaaagattaaagaaaacaagccttgtcttgtt
attaccacccaatgcattgaggctggcgtagatatagatatggattttgccatacgtgat
ttcgcaccattggattctatcgtgcaatgcgcaggcagatgtaatagaaatggattaaaa
aatagagctgatatcgatatcgtttcattaacaaatgaaaacggtaaaaaatatgcagga
tttatttatgacaaaacactgcttgaaaagacatcaatgatattgacaggaagaagcagt
atacacgaagaggatatttaccaagtaatgaaaaaatattttcaagaaataagaaattca
aaagatactggcaaaataattgccggcagatgggctttttggagggatgagttaaatata
aaaaagcttttacgcaatgaaagtgcaaagtattgttttattgtaacctctcaagatcag
cccaaaaatgatgagcttccattaaaagattccatattatcagctatcaagactgagtct
atttgggatagaaaaagaaaaatacgctccttgcaatcaagaatctcggaattaacaatt
tgtgtatgggccaacagcaatattattccagaggagatagccgagcctataggttgttat
tatttgttaaaagatggatattatattcctggcaaaggaatcaacatagaagacaataat
gtctcttgtaaatttttttga

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