Desulfosarcina ovata subsp. sediminis: DSCO28_27060
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Entry
DSCO28_27060 CDS
T06286
Symbol
kdnB
Name
(GenBank) 3-deoxy-alpha-D-manno-octulosonate 8-oxidase
KO
K19714
3-deoxy-alpha-D-manno-octulosonate 8-oxidase [EC:
1.1.3.48
]
Organism
dov
Desulfosarcina ovata subsp. sediminis
Brite
KEGG Orthology (KO) [BR:
dov00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01005 Lipopolysaccharide biosynthesis proteins [BR:
dov01005
]
DSCO28_27060 (kdnB)
Enzymes [BR:
dov01000
]
1. Oxidoreductases
1.1 Acting on the CH-OH group of donors
1.1.3 With oxygen as acceptor
1.1.3.48 3-deoxy-alpha-D-manno-octulosonate 8-oxidase
DSCO28_27060 (kdnB)
Lipopolysaccharide biosynthesis proteins [BR:
dov01005
]
Lipid A
DSCO28_27060 (kdnB)
BRITE hierarchy
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Paralog
GFIT
Motif
Pfam:
Fe-ADH
ADH_Fe_C
Fe-ADH_2
Motif
Other DBs
NCBI-ProteinID:
BBO82140
UniProt:
A0A5K7ZQP6
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All DBs
Position
complement(3018860..3019939)
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AA seq
359 aa
AA seq
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MFRNFKMVSKVVFGRGCFAQLGDILKEQRRADRSVMVFLVDDVHKNKPLKDRLPLENDDL
LIWVNVDDEPKTKYVDQLTGQVRTHMEEKPGDLPAGVIGIGGGSSMDLSKAVALMLTNPG
SAADYQGWDLIQNPAVYHAAVPTLSGTGAEVSRTTVLTGPEKKLGINSDHTVFDQIVLDP
ELIAGAPNPQRFYTGMDCYIHCVESLEGTYLNSFSQAYGEKSMALCQDVFLADPEDADDK
LMMASYCGGMSIAYSQVGICHALSYGLAFVLGLHHGIGNSVVFDYLEDYYPQGVRQFRQM
MERHRIDLPRNLTANLSDAQMEKMVDVALVLEPLWENALGNDWKTIMTREKIRELYRKM
NT seq
1080 nt
NT seq
+upstream
nt +downstream
nt
atgttccgcaattttaaaatggtctcaaaggtggttttcggccgggggtgcttcgcccag
ttgggagacattcttaaggaacagcggcgggcggaccgctcggtgatggtgtttctggtg
gatgatgtgcataaaaacaaacccctgaaggaccgtctgcccctggaaaacgacgacctg
ttgatctgggtcaatgtggatgacgaacccaaaaccaaatacgtggatcagctgaccggc
caggtccggacgcatatggaggagaaacccggcgatctgccggccggtgttatcggtatc
ggcggcggaagtagcatggatctctccaaggcggttgcgctgatgctcaccaacccggga
tcggctgccgattaccagggctgggacctgatccagaatccggccgtgtaccacgccgcc
gtgcccaccctgtccggcaccggcgccgaagtgtcccgcaccacggtgctcaccggcccg
gagaagaaactgggcatcaattccgatcacacggttttcgatcagatcgtcctggatccg
gagctgatcgccggtgcccccaacccccagcgtttttacacaggcatggattgctacatc
cactgtgtggaatccctcgagggcacctatctcaacagcttttcccaggcctatggcgag
aaatccatggccttgtgccaggacgtttttctggcggacccggaagatgccgacgacaaa
ctgatgatggcctcctattgcggcggcatgagcatcgcctactcccaggtgggcatctgc
catgccctctcctacgggctggccttcgtgctggggctgcaccacggcattggcaacagt
gtcgttttcgactacctggaagactactacccccagggcgtccggcaattccgccagatg
atggaacgccaccgcatcgacctgccgcgcaacctgacggccaacctctccgatgcccag
atggagaagatggtggatgtggccctggtcctcgaacccctgtgggaaaacgccctgggc
aacgactggaaaaccatcatgacccgtgaaaaaatcagggaactctaccgaaagatgtaa
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