Desulfosarcina ovata subsp. sediminis: DSCO28_27930
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Entry
DSCO28_27930 CDS
T06286
Symbol
ibeB_1
Name
(GenBank) membrane protein
KO
K18139
outer membrane protein, multidrug efflux system
Organism
dov
Desulfosarcina ovata subsp. sediminis
Pathway
dov01501
beta-Lactam resistance
dov02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
dov00001
]
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
DSCO28_27930 (ibeB_1)
09160 Human Diseases
09175 Drug resistance: antimicrobial
01501 beta-Lactam resistance
DSCO28_27930 (ibeB_1)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
dov02000
]
DSCO28_27930 (ibeB_1)
01504 Antimicrobial resistance genes [BR:
dov01504
]
DSCO28_27930 (ibeB_1)
Transporters [BR:
dov02000
]
Other transporters
Pores ion channels [TC:
1
]
DSCO28_27930 (ibeB_1)
Antimicrobial resistance genes [BR:
dov01504
]
Gene sets
Multipdrug resistance modules
Multidrug resistance, efflux pump MexAB-OprM [MD:
M00718
]
DSCO28_27930 (ibeB_1)
Multidrug resistance, efflux pump MexJK-OprM [MD:
M00642
]
DSCO28_27930 (ibeB_1)
Multidrug resistance, efflux pump MexXY-OprM [MD:
M00643
]
DSCO28_27930 (ibeB_1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
OEP
Motif
Other DBs
NCBI-ProteinID:
BBO82227
UniProt:
A0A5K7ZP42
LinkDB
All DBs
Position
complement(3127983..3129410)
Genome browser
AA seq
475 aa
AA seq
DB search
MRAVTGFSRLILILILGILMLVSCAPFQPERIPDASGPLPGTFAVYNAAVDVTLPWWPSL
GSPELNRLIDEALSGSFTLKESWARLRQTEALAIQAGAERFPAVTASGSAESTRGRTRTT
SNTSLWRESYLLALAGSYELDFWGRIRSAQEAALLDVSASRADLQTAAMTLTATVADRWL
QILSLKRQEKLLREQLQSSQTFLELIELRFRKAMVSALDVYQQKQVVENIRAKIPLIEAE
TRLLEHELAVLIGRPPRADLELTQAQMPTIGPLPAVGLPADLLAHRPDVRAAGLHLRAAG
WQVAEARANRLPKLQLGADLQYGPNELDLFFDTWLISLAANLTAPIFDGGRLAAAVDLTR
AQEDENLWAYRQAVLTAVKEVEDALESEARQREHIHGLAAVMEAARRGFEEAVQRYRRGL
SDYLPVLTQLIAVQDLEQNLIQQQETLIRYRIALHRALGGDWHGMTEPMVPKDQG
NT seq
1428 nt
NT seq
+upstream
nt +downstream
nt
atgcgcgcagtgactgggttcagccgactgattctgattctgattctgggaattctcatg
ctggtgtcatgtgcacccttccagccggagcggattcctgatgcgtcgggcccccttccc
gggacctttgccgtttataatgcggcggtcgatgtgaccctgccatggtggccgtcactg
ggctccccggaactgaaccggttgatcgatgaggcgctttcgggcagttttaccctgaag
gaatcctgggccagactgcgccagaccgaggcattggccattcaagccggcgccgaacgt
ttcccggccgtgaccgcttcgggctctgccgagtccacccgtggtcgtacgcggaccacg
agcaacacctccctgtggcgtgaaagttatctcctggcgctggccggcagttatgaactg
gatttctgggggcgcatccgcagcgcccaggaagcggcccttctggacgtatcggcctcc
cgggccgacctgcagacggctgcgatgacgttaaccgcaacggtggccgaccgctggctg
cagattctttccctgaaacgccaggaaaaactgctgagagaacagctgcagagcagccag
acctttctggaactgattgaactgcgtttcagaaaggccatggtttcggccctggatgtt
taccagcagaaacaggtggtcgagaacatccgcgccaagattcccctgatagaggcggaa
acccggctgcttgagcatgagttggctgtattgatcgggcggcccccccgtgcggacctg
gaactgacgcaggcgcaaatgccgacgatcgggccgctccccgcggtcggcttgccggcg
gaccttctggcccaccgccccgatgtgagggcggccggtttgcatctcagggccgccggg
tggcaggttgcggaggcccgtgccaatcgcttgcccaagttgcagctgggcgctgatctc
caatacggccccaatgaactggatctgtttttcgatacctggctgatcagcctggcggcc
aatctgacagcccccatcttcgatggcggtcggctggcagcagcggtggacctgacccgt
gcccaagaggacgaaaacctgtgggcgtatcgccaggccgtattgacggcggtgaaagag
gtcgaggacgcgctggagagcgaagcccggcagcgggaacatatccatgggctggcggcg
gtcatggaagcggcccgccggggcttcgaggaggccgtccaacgctatcggcgcggattg
agtgattacctgccggtgctgacccagttgatcgccgtccaggaccttgagcagaatctg
attcagcagcaggaaacgttgattcgctaccggattgccctgcatcgggcgctgggtggc
gactggcacggcatgaccgagccgatggtgccgaaagatcaaggataa
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