Desulfosarcina ovata subsp. sediminis: DSCO28_28320
Help
Entry
DSCO28_28320 CDS
T06286
Name
(GenBank) hypothetical protein
KO
K01176
alpha-amylase [EC:
3.2.1.1
]
Organism
dov
Desulfosarcina ovata subsp. sediminis
Pathway
dov00500
Starch and sucrose metabolism
dov01100
Metabolic pathways
dov01110
Biosynthesis of secondary metabolites
Brite
KEGG Orthology (KO) [BR:
dov00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00500 Starch and sucrose metabolism
DSCO28_28320
Enzymes [BR:
dov01000
]
3. Hydrolases
3.2 Glycosylases
3.2.1 Glycosidases, i.e. enzymes that hydrolyse O- and S-glycosyl compounds
3.2.1.1 alpha-amylase
DSCO28_28320
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Alpha-amyl_C2
Alpha-amylase
AMT4_dom_C
Motif
Other DBs
NCBI-ProteinID:
BBO82266
UniProt:
A0A5K7ZM68
LinkDB
All DBs
Position
3175879..3177309
Genome browser
AA seq
476 aa
AA seq
DB search
MISPTETTRDYEWQGDYHRFSLLGRPWSGCYALPWRSYLTAKKTSSVKIPAEKGGVMKNR
RIFFAILLFTSFSFVPLSAYPGTYHIMLQGFHWESSAVPQGWYTIILENSQRIKETGLNL
VWFPPPSASASPQGYEPTQLRNLQSAYGTEAQLREAIRVLSPEVNVLADIVINHRSGTNG
WADFTNPDWSTFTIVRDDEWGGEKSINTDLGNPAPFSRDLDHKNPETQNGIKSWMAWLKN
DVGFAGWRYDMVKGYAGWAIEIYNDHTLPAFAVGEYFDDDTAKVIDWIDSTHREWQKRTT
AFDFPLRNALYQAIAWGNYDWLKYHDRGAGVIGLWSDKAVTFIENHDTEEARNSAYAPPF
PDGDQTLQGYAFILTHPGTPCVFWKDIFDTGPERERRIKQLISIRKSYGIHSESKVWIDR
AGKGDCYAAYIFGDHGEIAVKIGPGSWSPTGSRWDPVDDLLTSGNGYAVWGEDGPK
NT seq
1431 nt
NT seq
+upstream
nt +downstream
nt
atgatttcaccaaccgaaacgacacgcgattacgaatggcaaggcgactatcatcgtttc
tctttattggggagaccatggagcggctgctacgcactcccttggcgcagttatttgaca
gcaaaaaagacctcatcggtgaaaatccctgccgaaaaagggggagtcatgaaaaatcga
cgtatctttttcgctatcttactatttacatccttttcctttgttcctctttctgcctac
cctggcacctatcatatcatgctgcagggatttcactgggagtctagtgccgtaccccag
ggatggtacacgattattcttgagaattcccaacggatcaaagagaccgggcttaatctt
gtctggttccctcccccgtctgcatcggcgtcaccccaggggtacgagcccacgcaactg
cgaaatttacaaagtgcatacggcactgaggcccaactgagagaagccatccgggtcttg
agtcccgaagtcaacgtgcttgccgatatcgtcatcaatcatcggtccggcaccaacggc
tgggcggatttcaccaatcccgactggtccacgtttacgatcgtccgtgacgacgaatgg
ggtggagagaaatccatcaacaccgatcttggcaatccggcccccttctcccgggacctg
gatcataaaaacccggaaacgcaaaacggaatcaaatcctggatggcgtggttgaaaaat
gacgtcggctttgcgggctggcggtatgacatggtcaagggctatgccggttgggccatc
gaaatctataacgatcatacgctgccggcgttcgcagtcggcgaatacttcgatgacgat
acggcaaaagtgatcgactggatcgattccacccaccgcgaatggcagaaaagaacgacg
gcgtttgacttccccttgagaaacgctctttaccaggcgatcgcctggggcaattatgac
tggctgaaatatcacgaccggggagccggggttatcggcctctggagcgacaaggcggta
acctttatcgaaaaccacgacacggaagaggccagaaacagtgcctacgcgcccccattt
cccgacggggatcagacgcttcagggatatgcatttattttgacgcaccccggaacccct
tgtgtgttctggaaggatatcttcgatacgggtccggagcgtgaaaggcgaatcaagcag
cttatttcgattcgtaaaagctacggcatccattcggaaagcaaggtctggatcgacagg
gcgggcaagggggattgctatgccgcctacattttcggagatcatggggagatagcggtc
aaaatcggtccgggaagctggtctccgacgggaagcaggtgggacccggtggatgatctg
ctcacctcgggaaatggttatgcggtatggggagaagacggtccaaaatga
DBGET
integrated database retrieval system
