Desulfosarcina ovata subsp. sediminis: DSCO28_28620
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Entry
DSCO28_28620 CDS
T06286
Symbol
irgA_1
Name
(GenBank) ligand-gated channel protein
KO
K16089
outer membrane receptor for ferrienterochelin and colicins
Organism
dov
Desulfosarcina ovata subsp. sediminis
Brite
KEGG Orthology (KO) [BR:
dov00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
dov02000
]
DSCO28_28620 (irgA_1)
Transporters [BR:
dov02000
]
Other transporters
Pores ion channels [TC:
1
]
DSCO28_28620 (irgA_1)
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GFIT
Motif
Pfam:
TonB_dep_Rec_b-barrel
Plug
OMP_b-brl_3
Motif
Other DBs
NCBI-ProteinID:
BBO82296
UniProt:
A0A5K7ZM87
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All DBs
Position
3210100..3212088
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AA seq
662 aa
AA seq
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MKICNMHCKRIGLLLTMLLLLLLPSGVWAEEETESVTKLQEIVVTGTRTSHAIKDVPVET
TLITREDIEKSNAQTVTDIVKTIPGLSATGTDDIFGSGSSRARLRGLSFNNGYGLILIDG
QRIHGSSQSGAHGEYAVGLNQIPVSMIERIEVVKGPSSVLYGSDAMAGVINIITRKVPEK
ATTGAGVKYGWYKVSKSLNYYTDAEVTPSDYGKHRIARNAYAYAGNKINDSMGFLFNYDH
EDSEGTSTSPYDYNRDSAMGKFDVVFSDTVSAWVKGEISEFERTTTSVTAEDSYRIAAGL
DFDISENHMLMFKGYHYLDEFSTSSRDGEIGFDQIEFQYTWNTGVGHVLTLGSEFQRQGI
DYYMNNTATVNDVTVETTTTVKEDVDTFSVYLQDEWTLFDKLVLVPGLRWDDHSTFGDSF
NPKLNVMYRVLENTSLRASVGKSFKSPTIRQLYYDVPFWHSPFWIASNPDLEPEESIGYS
AGIEQWLFDNKGMVNISYFRNEITDMVVTDTTGQTYEDAPLYIYENVEEATVQGVEVTAQ
FYPNDSFSLTAGYTFTDSEDESTGNDLTYTPDHAFSISPAYEYMPWGLGVSGTLAYASDQ
YTDTDNTRTQDAHVIVDGKIFKRLSKMAKITFEADNIFDSDHGDDRYTRTGRTFTVGMDM
EF
NT seq
1989 nt
NT seq
+upstream
nt +downstream
nt
atgaaaatttgcaacatgcactgcaaacgaattggattgcttctgacgatgttattatta
ttgttgctacccagcggggtctgggccgaagaagaaaccgaatcggtcaccaagctccaa
gagatcgtggtgaccggcacgcgtacctcccatgcaatcaaggatgtgccggtggagacc
accctgattacccgtgaggacatcgagaagagcaacgctcagaccgtaaccgacattgtc
aaaaccattcccggcctgtctgcaacgggtaccgacgacatttttggttccggctcttcc
cgagccaggctgcggggcttgagctttaacaacggttatggcctgatcctcatcgacggc
cagcggattcatggcagcagtcaaagcggcgcacatggagagtatgccgtggggctaaac
cagattcccgtttccatgatcgaaaggatcgaagtggtaaagggaccttcctcagtcctg
tacggcagtgacgccatggccggcgtgatcaacatcatcacccgcaaggtgcctgaaaaa
gccacgacgggtgccggcgtgaaatacggctggtacaaggtttctaagagtctcaactat
tataccgacgcggaggtcaccccctcggattatggcaaacaccgtatcgccagaaacgcc
tatgcctacgccggcaacaaaatcaacgacagcatgggttttttgttcaactatgaccat
gaagattccgaaggcaccagcacgagcccctatgactataaccgggactctgccatgggc
aagttcgacgttgttttcagtgatacggtaagtgcctgggtaaagggcgaaatcagcgaa
tttgaaagaacgactaccagtgtcaccgcggaagacagctatcgtatcgccgccggcctg
gacttcgatatttcggaaaatcacatgctcatgttcaagggctaccactacctcgatgag
ttctccacttctagccgggacggcgaaatcggttttgaccagatcgaattccagtatacc
tggaatacgggggtcggccatgtactcaccctcggaagtgaattccagcgccagggcatt
gactactatatgaacaacaccgcgaccgtcaacgatgtgaccgtggaaaccacgaccaca
gtgaaggaggacgtggataccttcagcgtatacctgcaggatgaatggaccctgttcgac
aagctggtactggttcccggccttcgttgggacgatcactccaccttcggcgattctttc
aaccccaaattgaacgtgatgtaccgggtgctggaaaacacctccctgcgcgcctcggtg
ggcaagtcctttaaatccccaaccatccgacagttgtattacgacgtacccttttggcac
tccccgttttggattgcgtcaaatccggacctggagccggaagagtccatcggctactcg
gcgggcatcgagcagtggctgttcgacaacaaggggatggtcaacatctcctacttccgc
aatgaaataaccgacatggtggttacggacacgaccggacagacatacgaagacgcgcct
ctgtacatctacgagaacgtggaggaggccacggttcagggggtggaagtcacggcccaa
ttctaccccaacgacagtttttccctcacagccggatacacctttaccgactcggaagac
gagtccacgggcaacgacctgacttatacccccgaccatgcgttcagcatatcccccgcc
tatgaatacatgccgtggggcctgggcgtcagcggaacgctggcatacgcgtccgaccag
tacacagataccgacaacacacgcacccaggacgcccacgtgattgtggacggcaaaata
ttcaaacggttaagcaaaatggccaaaatcacatttgaagcggacaacatcttcgactcc
gaccatggagatgatcggtatacccgcaccggcaggactttcacggtcggcatggacatg
gaattctaa
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