Desulfosarcina ovata subsp. sediminis: DSCO28_29440
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Entry
DSCO28_29440 CDS
T06286
Name
(GenBank) TonB-dependent receptor
KO
K02014
iron complex outermembrane recepter protein
Organism
dov
Desulfosarcina ovata subsp. sediminis
Brite
KEGG Orthology (KO) [BR:
dov00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
dov02000
]
DSCO28_29440
Transporters [BR:
dov02000
]
Other transporters
Pores ion channels [TC:
1
]
DSCO28_29440
BRITE hierarchy
SSDB
Ortholog
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Gene cluster
GFIT
Motif
Pfam:
TonB_dep_Rec_b-barrel
Plug
Motif
Other DBs
NCBI-ProteinID:
BBO82378
UniProt:
A0A5K7ZJG7
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All DBs
Position
complement(3317030..3319105)
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AA seq
691 aa
AA seq
DB search
MTFQSIKLSILCILSVSLAFSILTKEVNADESETYRLDEITVTANKHEEKIQEIPASISV
FTAIDLEDANITTLSDLMNLVPNLKANDNNGIRDISFRGLGSSRYTFKNPVTIYIDGVPS
DKVLFTDIDFNNVERVEVLRGAQGVLYGKNSIGGIINVITKPSGNAVEGKINTEFAEHQT
YGAKGCVNAPLITNRLYLSLSDNYRKTDGYMTNDHPDEDTYGGYYENSFRTRMNWLPTDM
LEMDFNASLYKYSGDHTSTIYGNTNEVVYHSYKDPDDELSKDSLNLSMSINYSFEKAELK
IISTYTDAMYDRFSKRLYEGASMIDGGMKLELDTFTQEVRIQSAADNSFKWMAGLFYSNE
DIDNKKQFAVYDTHETLGYDKHMNWPTKTYEDTIAAFGEVTLPFGRFNLTTGIRYERTDA
AMDYRYEESRADTGALVKDPVTYHTEDDWDVLIPKGVLSWQYSDNCMIYASIAKGYLAGG
YNLAEADADYARIDNQTSINYEAGFKTMHFGNRIMLNAAIYYMDIKDIHVLIEGIDTGTF
IASNAGAAHSQGIEIESVFNVMKGLDLMASFGIIDGEYDEYLYDKNTDYSGNKLIRTPEY
SFNVGISYRHDSGLFARADVCGYGDTYFNPGNTKKQSSYEIYNVKIGYKASSWEVYGYGK
NIFDEEYFTNMDVLNTVGAPSTFGIIATLTY
NT seq
2076 nt
NT seq
+upstream
nt +downstream
nt
gtgacttttcaatcgattaagctcagtatactttgcattctttctgtaagcttggcattt
tcaatactcacaaaggaggtgaatgccgatgaaagtgaaacctatcgccttgatgaaata
acggttacggcaaataaacatgaggagaaaattcaagaaattcccgcatccataagcgta
tttacggcaatagatcttgaggatgccaatataacgaccctatcggatctcatgaattta
gttcccaaccttaaggcaaatgacaacaacggcattagagacattagtttcagaggattg
ggcagcagcagatatacgtttaagaaccctgtaaccatctatatagacggcgtccccagt
gataaggtattgtttacggacattgattttaacaacgtggaaagagttgaggtgttgaga
ggtgcacaaggtgttttatacggtaagaattccatcggtggtattatcaacgttatcacc
aaaccgtcgggaaatgccgtggaaggaaaaatcaataccgagtttgcagagcaccagacc
tatggtgcgaaggggtgtgtcaatgcccccctaataacaaatagactgtatttgagtctt
tcggacaattatagaaaaacagacggatacatgacaaacgatcaccccgatgaagacaca
tacggcggttattatgaaaacagtttcagaaccaggatgaactggttgccgacggatatg
ttggaaatggattttaatgcatctctttataaatactcaggcgatcatacctcaacgatt
tatggcaacacgaatgaggtcgtctatcattcatacaaagatcccgatgatgaactgtca
aaggactcattgaatttaagcatgagcataaactacagctttgaaaaggcagaattgaaa
attatcagcacgtatacggatgccatgtatgacaggttcagcaaaaggctctatgaaggg
gcttccatgatagacggtggcatgaagctggaactcgatacctttacccaggaagttcgt
attcaatcggctgctgataattcattcaagtggatggccgggctgttctactcaaatgaa
gatattgataataaaaaacagtttgccgtctatgatacccatgaaaccttgggatatgat
aaacatatgaactggcctaccaaaacctatgaagacaccattgccgcatttggagaggtc
accctaccctttggaagattcaacctcaccacgggtatcagatatgaacgaaccgatgcg
gcaatggattaccgatatgaagaaagccgggcagacacaggagcgttggtcaaggacccg
gtcacctatcatactgaggatgactgggatgtcttgattcccaaaggtgttctgtcttgg
cagtacagtgacaactgcatgatctatgcaagtatcgccaaaggctatctggccggggga
tacaatttggctgaggccgatgcggattatgcaaggattgataatcaaacatccattaat
tatgaagcaggattcaaaacaatgcattttggcaaccgaataatgttgaatgctgcgata
tattatatggatattaaagatatacatgttcttatagaggggattgataccggaacattt
attgcgtcaaatgcaggggcggcacatagtcagggcattgaaatcgagagtgtcttcaat
gttatgaagggtcttgatttgatggcatcctttgggatcatcgatggtgaatatgatgag
tatctttatgataaaaatacggactattccggaaataagctcatacgcacaccggagtat
agttttaatgtcggcatatcataccggcatgattcaggactctttgcacgcgctgatgtt
tgcggatatggtgatacgtattttaaccccggcaacactaaaaaacagagctcatatgag
atatataatgttaaaataggctataaagcttcatcatgggaagtctatggttatggcaaa
aatattttcgatgaagaatattttaccaatatggatgtattgaataccgtcggagcaccc
agcacatttggtataattgccaccttaacgtattaa
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