Desulfosarcina ovata subsp. sediminis: DSCO28_30060
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Entry
DSCO28_30060 CDS
T06286
Name
(GenBank) TonB-dependent receptor
KO
K16089
outer membrane receptor for ferrienterochelin and colicins
Organism
dov
Desulfosarcina ovata subsp. sediminis
Brite
KEGG Orthology (KO) [BR:
dov00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
dov02000
]
DSCO28_30060
Transporters [BR:
dov02000
]
Other transporters
Pores ion channels [TC:
1
]
DSCO28_30060
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TonB_dep_Rec_b-barrel
Plug
OMP_b-brl_3
DUF2490
Motif
Other DBs
NCBI-ProteinID:
BBO82440
UniProt:
A0A5K7ZQX2
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All DBs
Position
3391637..3393706
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AA seq
689 aa
AA seq
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MKRFVIQLNHRRFFSSIFLIGLILLAFQHPVTADESQASQPAAEIVSMDDIVVTATRSER
SAAEIYADVEIISSEEIADSSSNNLLDLLRGIPGMDNRGQTGQGGWFSTDIRGIDSSRGM
LMMVDGVPLNSGLSDFTYTSGIDLSIIDQIEVVKGNFSSLYGSNAMGGVINVITKKRETD
GFDITGRMDAGDFGFYEYGSNVIGRKGRLTYSINASQQHFDNRYRRDQQLEYERSGMMGN
YTYTKVYTDIEDADSDNSRVFARIDYDVDDTTGFTFSGNYATSSENLGKSENLPTVRDLG
DKEQDTYFLNLNAHTTLLDDLDLDLQLYTNYDERDTNKEQRVSSGMMGSSYEMGHQNFWG
RNNGLQIKANTSIFARHYITSGIDANYKQGYWKETYEDGEVIDTPLDKTMTNYAVYLQDE
IDLAPVTITLGGRYDANSESEDAFSPKLGLFYKMSDRISFHGSAGKAFRAPTLQEMYQPT
WLMGMYWFYSNPDLEPETVWSYDLGTTIKITPKIDFFVTGFYSKAEDLISTSPTIIDGQT
VRIYENLEEVETDGFEAGIAGWLTSWLTFNLNYTYTHSVEKGEGRLADVPLHQANLSLGT
RTPIGKHLVLNTTLNARYSGETTYVDSMTDMTVEELDGFTVLDFIVRLNILEKHSLKFAM
YNILEEEYQVHGSNLGPERYFWAGAEFTF
NT seq
2070 nt
NT seq
+upstream
nt +downstream
nt
atgaaacgatttgtaatccagttgaatcacaggcggtttttctcttctattttcctgatc
ggtctgattttgcttgcctttcaacatcctgtcacggcagatgaatcccaggccagtcaa
cccgcggcagaaatagtaagtatggatgacatcgtcgtcaccgccacgagatcggaaaga
tcggcagctgagatatatgccgacgtggagattatctccagcgaggagattgccgactcg
tccagcaataacctgctggatttgttgcggggaatccctggtatggacaaccgggggcag
acaggccagggcggatggttttccactgacatcaggggcattgacagcagccggggcatg
ttgatgatggtcgatggggtgccgttgaattccggattgtccgactttacctatacttcc
ggtatcgatctgagtatcatcgaccagatcgaggtcgtcaagggaaacttttcttctctt
tacggaagcaacgccatgggcggggtaatcaacgtcattaccaagaaaagggagaccgac
ggctttgatattaccggcaggatggacgccggcgacttcgggttctatgaatatggttcg
aacgtcatcggccgaaagggcaggctgacctattccatcaatgccagccagcagcacttc
gacaaccgctaccgccgggatcaacaactggaatatgagagaagcggcatgatgggcaat
tatacatacaccaaggtgtataccgatatcgaggatgccgattccgacaactcgagggta
ttcgcccgcatcgactatgatgtggacgacaccacgggcttcactttctcaggaaattat
gccacgtcaagcgaaaatttgggaaaaagcgagaatttgcccacggttcgtgatctcggg
gacaaggagcaggacacctatttcctaaacctcaacgcccacacgacattactggatgat
ctggatctggatttacagctctataccaactatgacgagcgagacaccaacaaggaacaa
cgggtcagcagcggaatgatgggctcgtcctatgaaatgggtcatcagaatttctggggc
cgcaacaacggcctgcaaatcaaggccaacacatcaatctttgcaaggcactatattacg
tccggcatcgatgccaattacaagcaagggtactggaaagaaacctatgaggacggcgag
gtgatcgacacgcccctggacaaaaccatgaccaactacgcggtctaccttcaggacgaa
atcgacttggcccccgtgacgatcacccttggcgggcgctacgatgccaattccgagtcg
gaagacgccttttctcccaagctcgggcttttctataaaatgtccgacaggatcagcttt
catggttccgcagggaaggcatttcgtgcgccgacacttcaggaaatgtaccagccgacc
tggctgatgggcatgtactggttttattcaaacccggacctggaacccgaaactgtctgg
tcctacgatctgggaaccacaataaaaataaccccgaaaatcgatttcttcgtgaccggc
ttttattccaaggccgaggatctcattagcacttcgccgacgatcatcgacggtcaaacg
gtgagaatttatgaaaacttggaggaggtggaaaccgacggtttcgaagccggcattgcg
ggctggctgacgtcgtggctgaccttcaacctgaactacacctacacccactcggtggaa
aagggcgagggacgcctggcggatgtccccctgcaccaggccaatttaagcttgggaacc
agaacccccatcggtaaacaccttgtcctgaacaccacactcaatgccaggtacagcgga
gaaaccacctatgtcgacagcatgaccgacatgaccgtggaagaactggacggcttcacg
gtcctggattttatcgtgcgcctcaacatcttggaaaagcacagccttaaattcgccatg
tacaacattctcgaagaggaataccaggttcacggctccaatctcggcccagaacgatat
ttctgggcaggcgcggagttcacgttctga
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