Desulfosarcina ovata subsp. sediminis: DSCO28_30540
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Entry
DSCO28_30540 CDS
T06286
Name
(GenBank) transpeptidase
KO
K19236
L,D-transpeptidase
Organism
dov
Desulfosarcina ovata subsp. sediminis
Pathway
dov01503
Cationic antimicrobial peptide (CAMP) resistance
Brite
KEGG Orthology (KO) [BR:
dov00001
]
09160 Human Diseases
09175 Drug resistance: antimicrobial
01503 Cationic antimicrobial peptide (CAMP) resistance
DSCO28_30540
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
dov01002
]
DSCO28_30540
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
dov01011
]
DSCO28_30540
Peptidases and inhibitors [BR:
dov01002
]
Cysteine peptidases
Family C82
DSCO28_30540
Peptidoglycan biosynthesis and degradation proteins [BR:
dov01011
]
Peptidoglycan biosynthesis and degradation
Transpeptidase
DSCO28_30540
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
YkuD
SPOR
LysM
Ldt_C
Motif
Other DBs
NCBI-ProteinID:
BBO82488
LinkDB
All DBs
Position
complement(3439622..3440905)
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AA seq
427 aa
AA seq
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MVCYFLMLSIGMLLLNGCAVTRDVLEILPRSGQAPDSIEKNYFIVEEKDDVVGWLATIRL
EKGDTLPDIARHFSLGINTVSAANPGVDVWVPKAGERIVLPLSFILPEANRKGIVINLAA
MRLFHFKRDGKVQAVATYPVGVGTTERPTPKGRMYIARKKFRPTWFVPASIAADHRKKGD
PLAAMVPPGPLNPLGEHALYLSRSEYLIHGTNKPASIGLRATNGCIRLYPEDIKQLFEIT
PVKTPVSVVYQPYLVGWRDGRVYLEAHTPFEEFGTAELEKAYAKLKKIEKKTGDRLDWHK
IKTVVAEARGIPVAISAIGAEGDPAARKTIKLRHPVRLYGQPPVPELRTDAWYVLAAIMG
DPVEALRLATILNHQGPPISSQVLSKDGRYRVLAGPFKTNGEAKNASRRMRIDLEIDGIV
VAPVQHK
NT seq
1284 nt
NT seq
+upstream
nt +downstream
nt
atggtttgttattttctgatgctgtcgatcggcatgctgttgctcaatggctgtgccgtt
acccgggacgttctggagatactgccgcgatcaggccaggcgccggacagtatcgaaaaa
aattactttatagtggaggaaaaagacgacgttgtcggctggctggcgaccatcagactt
gaaaaaggggacacgctgccggatatcgctcgccacttcagcctggggatcaatacggta
agtgccgccaacccaggggtggatgtatgggtgcccaaggccggagaacgcattgtgctg
ccgcttagttttatcctgccggaggcgaacagaaagggcatcgtgataaacttggccgcg
atgaggctttttcacttcaaaagagacggtaaggtgcaggccgttgcaacttatcctgtt
ggtgtcggtaccactgagcggcccacgcccaaaggccgaatgtatatcgcacgcaaaaaa
ttccggccgacttggtttgtgcccgcatcgattgcggcagaccaccgcaaaaagggtgat
ccgctggcagccatggtaccgccggggcctctgaaccccttgggtgaacacgcgctatat
ttgagcagatcagagtacctgatccatggaaccaacaaaccggccagcatcggtctgagg
gcaaccaacggctgcatacgactttacccggaagacatcaagcagctctttgaaatcact
ccggtgaaaacaccggtaagcgtcgtgtaccagccctatcttgtaggctggcgtgatgga
cgggtttacctggaagcccatacgcccttcgaagaattcggcaccgctgagttggagaag
gcctatgcaaaattgaaaaaaattgaaaaaaaaaccggcgacaggcttgactggcacaag
atcaagacggtcgtggccgaggcccggggaatccctgttgccatatccgccatcggtgcc
gaaggcgatcctgccgcccggaaaaccataaaactcagacatccggtcaggctttacggc
cagccaccggtgccggaactcagaaccgatgcgtggtatgtgttggccgccattatgggc
gatccggttgaggccctcaggcttgccaccatcctcaaccaccaaggaccgccaatctcc
tcacaggtgttgtcaaaggatggtcggtaccgtgtgcttgccggcccgttcaaaaccaac
ggagaggctaaaaatgcgtcacggcgaatgagaattgatctggagatcgacggcattgtg
gtcgctcccgtgcagcacaaatag
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