Desulfosarcina ovata subsp. sediminis: DSCO28_32330
Help
Entry
DSCO28_32330 CDS
T06286
Name
(GenBank) ribonuclease D
KO
K03684
ribonuclease D [EC:
3.1.13.5
]
Organism
dov
Desulfosarcina ovata subsp. sediminis
Brite
KEGG Orthology (KO) [BR:
dov00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
dov03016
]
DSCO28_32330
Enzymes [BR:
dov01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.13 Exoribonucleases producing 5'-phosphomonoesters
3.1.13.5 ribonuclease D
DSCO28_32330
Transfer RNA biogenesis [BR:
dov03016
]
Prokaryotic type
3'processing and CCA adding factors
3'processing factors
DSCO28_32330
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol_A_exo1
HRDC
DNA_pol_A_exoN
Motif
Other DBs
NCBI-ProteinID:
BBO82667
UniProt:
A0A5K7ZPP8
LinkDB
All DBs
Position
3647260..3648450
Genome browser
AA seq
396 aa
AA seq
DB search
MESREKALPGQAKNMNNLAVPPYRLIRTNDDLKQFAGKIDREPFLAVDLEADSMFHYQEK
VCLVQMAGNGENVVIDPLEVNDLAPLAPLFKNKRICKVFHGSDYDIRSLYRDFSIEINNL
FDTQLASMYLGEKETSLGAVVNNRFGIQLDKRYQKKDWSQRPLPDGMIEYAASDVFYLIP
LAKALMTELEAKGRLAWVVEECEYLSGVRPVENGDDPLFLRFRGAGRLQRRNLAVLEGLL
QYRKDLAMKKDRPLFKVFSNTSLLKIANEMADTPQAMEAGRCLSPKQIRIHGNSLAEIVK
QAKAIPSDKLPVYPRKRRPSVSPKVPDRVKAIKVWRDKIAEDLELDPALLFNKALLTAIA
VKRPTTKKELAGIEGIRNWQVKDFGKDLLTVLSTVP
NT seq
1191 nt
NT seq
+upstream
nt +downstream
nt
atggaaagtagggaaaaagccctgccgggtcaagcaaaaaatatgaacaacctcgccgta
ccgccataccggctcatccgaaccaatgacgatctcaagcagtttgccggcaagatcgac
cgggaaccatttctggccgtcgatctggaggcggactccatgtttcactaccaggaaaaa
gtgtgtctggtgcaaatggccggcaacggggagaatgtggtcatcgatcccctcgaagtc
aacgaccttgcccccctggcaccgctttttaaaaataagcggatctgcaaggtattccac
gggtccgactatgacatacgctccttgtaccgggatttctccattgaaatcaacaatctg
ttcgacacccaactggccagtatgtatctgggcgagaaggagaccagcctgggggcggtg
gtcaacaaccggtttggcatccagttggacaagcgttaccagaaaaaagactggtcccag
cggcccctgcccgacgggatgatcgagtatgcggcatcagacgttttctatctgatcccg
ttggccaaggcgctcatgaccgagttggaggccaagggaagattggcgtgggtcgtggaa
gagtgtgaatacctgtccggcgtcaggccggtggaaaacggcgacgacccgctgttcctg
cgttttcgcggcgccggtcgcctgcagcggcgcaacctggccgttctggagggactgctg
cagtaccgcaaggacctggccatgaaaaaagaccgtccgctgttcaaggtcttctccaac
acctcgctgctcaaaatcgccaatgaaatggccgacaccccccaggccatggaggccggc
cgctgccttagccccaaacagatccggatccacggcaacagcctggcggaaattgtcaaa
caggccaaggccatcccctccgacaagctgcccgtctacccgcgcaaacggcggccctcg
gtatcacccaaggttcccgaccgggtcaaggcgatcaaggtatggcgcgataaaatcgcc
gaggatctggaactggaccctgccctgctcttcaacaaggccctgctcactgccattgcc
gtcaagcggcccaccacgaaaaaggaactggccgggatcgagggcatccgcaactggcag
gtgaaggattttggaaaagacctgctgacggttctgtcaacggttccctga
DBGET
integrated database retrieval system
