Desulfosarcina ovata subsp. sediminis: DSCO28_33800
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Entry
DSCO28_33800 CDS
T06286
Name
(GenBank) hypothetical protein
KO
K08307
peptidoglycan lytic transglycosylase D [EC:
4.2.2.29
]
Organism
dov
Desulfosarcina ovata subsp. sediminis
Brite
KEGG Orthology (KO) [BR:
dov00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
dov01011
]
DSCO28_33800
Enzymes [BR:
dov01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.2 Acting on polysaccharides
4.2.2.29 peptidoglycan lytic transglycosylase
DSCO28_33800
Peptidoglycan biosynthesis and degradation proteins [BR:
dov01011
]
Peptidoglycan biosynthesis and degradation
Lytic transglycosylase
DSCO28_33800
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GFIT
Motif
Pfam:
SLT
LysM
LysM3_LYK4_5
Motif
Other DBs
NCBI-ProteinID:
BBO82814
UniProt:
A0A5K7ZMM5
LinkDB
All DBs
Position
complement(3836116..3837609)
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AA seq
497 aa
AA seq
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MIFKWLSIWIAVASLMLTVPVLPGHTADPLFPEYPEITANVAFWTDIYATYPTTRAVVHD
SLRLNIVYDVIDLEPVDHPGSRKVNRRRMKAARLKYGRILKRLAADPQAKDTESERVAGL
FGPRATARTFDHARHRVRCQIGQRDRFRSGLIRSGAYFDQMRAIFQAYGLPGDLAYLPHV
ESSFDTRVTSKSGAAGMWQFTRSTGRRFLTVDHMIDERRDPIAATHAAAQLLMENYAKLG
SWPLAITAYNHGAAGMQRAKAAHGSYPAIFSSYRGRTFKFASRNFYSEFLAARQVAVNYP
HYFGQLTLKTPVPLQTLPLDGYVAWADLCRHLECHPQVLQALNPALMPPVLSGQKYLPRG
YVLNLPRQDPFEGAEPMAVLPLDLFKPAQRASRYYTVRAGDTAGKIARMHRVRVADLVLA
NNLDHRATVYLRQRLRIPHLPTRTSEEKRFPASSSSSSVVENAAVKSSAAGKRPAILDTI
PVECGDMRYRRSPISPI
NT seq
1494 nt
NT seq
+upstream
nt +downstream
nt
atgatcttcaagtggctatccatttggatcgcggttgcttcattgatgctgaccgtaccg
gttttacccggccacaccgccgacccgcttttccccgaatatccggagattacggccaat
gtcgctttttggaccgatatctatgcgacctatccgaccacccgggccgttgtgcacgac
agtttgcgcttgaatattgtttatgacgtgatcgatctggagccggtcgaccatccgggt
tcccgtaaagtcaaccggcggcgcatgaaagcggctcggctcaaatatggtcgcatcctg
aaacggctggctgccgacccgcaggccaaggatacggagagcgagcgggttgccgggttg
ttcgggccccgggccactgcgcgcaccttcgatcatgcacgccaccgggtgcgctgccag
atcggtcagcgggaccgcttccggagtggtctgattcgttcgggggcctacttcgaccag
atgcgggcgatttttcaagcctatggcctgcccggcgatctggcctatctgccccacgtg
gaatcctcattcgatacccgggtgaccagcaaatccggcgctgccggcatgtggcagttc
acccgttccaccgggcggcggtttctgaccgtggaccatatgatcgacgagcggcgcgat
cccattgccgccacccatgcggccgcccaactgcttatggaaaactatgcaaagctgggc
agctggcccctggcgatcacggcctataaccatggtgccgcaggaatgcagcgggccaaa
gccgcgcatggcagttacccggccattttttccagctaccgggggcggactttcaaattc
gcctcgcgcaatttctattcggaatttctggcggcccggcaggtggcggtcaactacccg
cactattttggtcagctgaccctgaaaacgccggtgcccctgcaaacgctgccgctcgat
gggtatgttgcctgggcggatttgtgtcgtcatctggagtgccatccccaggtgctgcag
gccttgaatccggcgctgatgccgccggtgctcagtggccagaaatatcttccccggggg
tatgtgctgaacctgccccggcaggatccattcgagggcgccgaacccatggcggtgttg
cccctggatctgttcaaaccggcgcagcgggccagtcgttactataccgtccgggccggg
gacaccgccggtaaaattgcccgcatgcaccgggtgcgggtggcggatctggtcctggcc
aacaacctggatcaccgggccaccgtttatctccggcagcggttgcggatcccccatctc
cccacgcgcacttctgaagaaaagcgttttcccgcgtcctcctcctcctccagcgtcgtt
gaaaatgcagccgtgaaatcttcggctgccgggaagagacctgccatcctcgataccata
ccggtggaatgcggcgatatgagatatcgacgttccccaatttcaccaatataa
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