Desulfosarcina ovata subsp. sediminis: DSCO28_35210
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Entry
DSCO28_35210 CDS
T06286
Symbol
murD
Name
(GenBank) UDP-N-acetylmuramoylalanine--D-glutamate ligase
KO
K01925
UDP-N-acetylmuramoylalanine--D-glutamate ligase [EC:
6.3.2.9
]
Organism
dov
Desulfosarcina ovata subsp. sediminis
Pathway
dov00470
D-Amino acid metabolism
dov00550
Peptidoglycan biosynthesis
dov01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
dov00001
]
09100 Metabolism
09106 Metabolism of other amino acids
00470 D-Amino acid metabolism
DSCO28_35210 (murD)
09107 Glycan biosynthesis and metabolism
00550 Peptidoglycan biosynthesis
DSCO28_35210 (murD)
09180 Brite Hierarchies
09181 Protein families: metabolism
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
dov01011
]
DSCO28_35210 (murD)
Enzymes [BR:
dov01000
]
6. Ligases
6.3 Forming carbon-nitrogen bonds
6.3.2 Acid-D-amino-acid ligases (peptide synthases)
6.3.2.9 UDP-N-acetylmuramoyl-L-alanine---D-glutamate ligase
DSCO28_35210 (murD)
Peptidoglycan biosynthesis and degradation proteins [BR:
dov01011
]
Precursor biosynthesis
Amino acid ligase
DSCO28_35210 (murD)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Mur_ligase_M
MurD-like_N
Mur_ligase_C
NAD_binding_7
Shikimate_DH
PGK
DAO
2-Hacid_dh_C
TrkA_N
Pyr_redox_3
iSirtuin
MurD_N
Pyr_redox
Motif
Other DBs
NCBI-ProteinID:
BBO82955
UniProt:
A0A5K7ZRX0
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All DBs
Position
complement(4026286..4027647)
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AA seq
453 aa
AA seq
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MDLNNKRVVVVGLGRSGVATVRFLVRQGARVTVSDRAAASALKPAIDALAGLDVRLKLGG
HDAGDFEHADLVVLSPGVPHTQPMLEPAWAAGIPVIGEMELAAAHVQAPIIAVTGTNGKT
TTTELVGEMLKNSGKRVFVGGNIGTPLIAYADGAYGTADVIVAETSSFQLDTTVDFRPAT
AVVLNITDDHLDRYAGFSAYAASKWRIFANQHSGDLAVFNAMDATVAGMLDRVGLRARRQ
PFSDQPLNQGAQITGDAIMIMENGRRTAVFSLAKSALIGPHNRENLAAACLAARAHGASR
EGIQQTIDTFGGLAHRVEPVGTVRGVRFVNDSKATNVDAVKRALECFDVPVVLIMGGQNK
KGDFSRLKALVRRRVKTLVVLGQARDEIVTALAGDPRAGIIEVATMDEAVTQAFAAAEDG
EAVLLSPACASFDMFDSYAHRGDCFRKAVERLL
NT seq
1362 nt
NT seq
+upstream
nt +downstream
nt
ttggacctgaacaacaaacgtgtcgtggtggtggggttgggacgctcgggcgtggccacc
gtccgttttctggtccggcaaggggcccgcgtgaccgtttccgaccgtgcggcggcgagc
gccctcaagcctgccatcgacgccctggcgggactggatgtgcggctgaagctgggcggc
catgatgccggcgatttcgaacatgccgacctggtggtgctcagccccggcgtgccccac
acccagccgatgctggagccggcatgggccgccggtatcccggtgatcggcgaaatggaa
ctggccgcggcgcatgtgcaggcaccgatcatcgccgtgaccggcaccaacggcaagacc
acgacgaccgaactggtgggggagatgctcaaaaacagcggcaaacgggtctttgtcggc
ggaaacatcggtacgccgctgatcgcctatgctgacggcgcatacgggacggcggatgtg
atcgttgccgaaacgagcagtttccagctggacaccaccgtcgatttcaggccggcgacc
gcagtggtgctcaacatcacggacgaccacctggatcggtacgccggcttttcggcctac
gcggcgtccaaatggcgcattttcgcgaatcagcattccggggatctggcagtgttcaat
gccatggatgccaccgtggccgggatgctggatcgtgtcgggctgcgtgcccggcggcag
ccgttttccgatcagccgctgaaccagggggcccagattacgggcgatgcgatcatgatc
atggagaacggacggcggacggcggttttctccctggccaaaagcgccctgatcggaccg
cacaaccgcgagaacctcgccgccgcctgcctggccgcccgggcccatggggccagccgc
gaggggattcagcagaccatcgacacgtttggcgggctggcccaccgggtcgaaccggtg
ggcacggtgcgtggcgtgcggttcgtcaacgactccaaggccaccaacgtggacgcggtc
aaacgcgccctggagtgttttgatgtgccggtggtgctgattatgggcggacagaacaag
aaaggggatttcagccggctcaaagccctggtgcgccggcgggtaaagaccctggtggtc
ctgggccaggcccgggacgagatcgtcaccgccctggccggtgatccccgggcgggcatc
atcgaagtggccaccatggatgaggccgtgacccaggcgtttgccgccgccgaggacggg
gaagcggtgctgctttcgccggcctgcgcgagttttgatatgtttgacagctatgcccat
cggggcgactgttttcgaaaagccgtggaaaggttgctatga
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