Desulfosarcina ovata subsp. sediminis: DSCO28_35270
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Entry
DSCO28_35270 CDS
T06286
Symbol
rsmH
Name
(GenBank) ribosomal RNA small subunit methyltransferase H
KO
K03438
16S rRNA (cytosine1402-N4)-methyltransferase [EC:
2.1.1.199
]
Organism
dov
Desulfosarcina ovata subsp. sediminis
Brite
KEGG Orthology (KO) [BR:
dov00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
dov03009
]
DSCO28_35270 (rsmH)
Enzymes [BR:
dov01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.199 16S rRNA (cytosine1402-N4)-methyltransferase
DSCO28_35270 (rsmH)
Ribosome biogenesis [BR:
dov03009
]
Prokaryotic type
rRNA modification factors
16S rRNA modification factors
DSCO28_35270 (rsmH)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Methyltransf_5
Methyltransf_25
Methyltransf_11
Methyltransf_31
MTS
GCD14
Motif
Other DBs
NCBI-ProteinID:
BBO82961
UniProt:
A0A5K7ZRX5
LinkDB
All DBs
Position
complement(4033826..4034764)
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AA seq
312 aa
AA seq
DB search
MSGYHITAMLDEAVEMLALRPGRIIVDGTLGGCGHARQICRRIAPGGTLIGIDQDRDAID
RARRVLPIDDLKIHIVHGNFVDLPLFLSQLDIAAVDGILIDIGLSQHQIEASGRGFSFNR
DEPLDMRMDIRSSVTAAELVASMGERELATLFSRYGEERWAMRIARHLVARRKTQPVKTS
GQLARLVVEAVPAGAARSQKIHPATRVFMALRIAVNRELEVLDRFLETAVDLLNPGGRLC
VLAFHSLEDRIVKQRFRLLENPCTCPPSFPRCVCGLTPTVRRVNRKVLRPTDDEVSKNPM
ARSTRLRAVERL
NT seq
939 nt
NT seq
+upstream
nt +downstream
nt
gtgtccggctaccacatcaccgccatgctcgacgaggcggtggagatgctggccctaagg
ccgggccgcatcatcgtcgacggtaccctgggtggatgcgggcacgcccggcaaatttgc
cgcaggatcgctcccggcggcaccctgatcggcatcgaccaggaccgtgatgccatcgac
cgggcccgccgggtactgccgatcgacgatttgaagatccatatcgtccacggtaatttt
gtggacctgccgttgtttctttctcaactggacattgctgccgtagacggcattcttatc
gacatcggcctttctcagcatcagatcgaggccagcggtcggggcttcagcttcaaccgc
gatgaacccctggatatgcgcatggacatccgatcctcggtaactgccgcagaattggtc
gcctccatgggtgaacgggaactggcaaccctgttcagccgttacggcgaagagcgttgg
gccatgcggattgcccggcacctggtcgcccggcgcaagacccagccggtgaagaccagt
ggccagttggcccggctggtggtggaagcggtgcccgccggtgcggcgcggtcccagaag
attcacccggccacgcgggtgttcatggccctgcgcatcgccgtgaaccgtgaactggag
gttttggaccggttcctggagacggctgtcgacctgctcaacccgggcgggcgtctgtgc
gtgttggcgttccactcccttgaggaccggatcgtcaaacagcgttttcgcttgctggag
aacccgtgcacctgtccgccgtcgtttccccgttgcgtgtgcgggcttacgcccacggtt
cgccgggtgaaccgcaaggtgctgcggcctacggacgatgaagtgagcaaaaatcccatg
gcgcgcagtacccgcctccgggccgtggagcggctgtaa
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