Desulfosarcina ovata subsp. sediminis: DSCO28_36990
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Entry
DSCO28_36990 CDS
T06286
Name
(GenBank) hypothetical protein
KO
K15836
formate hydrogenlyase transcriptional activator
Organism
dov
Desulfosarcina ovata subsp. sediminis
Brite
KEGG Orthology (KO) [BR:
dov00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
dov03000
]
DSCO28_36990
Transcription factors [BR:
dov03000
]
Prokaryotic type
Helix-turn-helix
Other families
DSCO28_36990
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Sigma54_activat
Sigma54_activ_2
AAA_5
HTH_8
PAS_4
PAS_9
AAA_2
Mg_chelatase
AAA
PAS
AAA_16
IstB_IS21
AAA_7
TiaS_TCKD
CCDC90-like
ZapD
Motif
Other DBs
NCBI-ProteinID:
BBO83133
UniProt:
A0A5K7ZSE4
LinkDB
All DBs
Position
complement(4220439..4221920)
Genome browser
AA seq
493 aa
AA seq
DB search
METTFLDIFNCILGSIREPLVVLDSDLNVVKANHSFYHTFNVKPEQTEGILIYNLGNRQW
DIPKLRELLEKILPQNTIFNDFEVEHHFETIGQKIMHLNARRIYTESNQTQLILLAIEDV
TEREYYKRHLEEMVTKRTAELSVAREEAEHSKHLAETALDEIKQLKNQLEAERAYLQEEI
KLEFNHENIIGRSNEIKYVFYKVEQIAATDTNVLVLGETGTGKELVARAIHGLSARKDRA
LVKMNCAALPSNLIESELFGHEKGAFTNAHSRRLGRFEIANGTTLFLDEIGELPLDLQPK
LLQVIETGEFERLGSSETINVDVRIIAATNRNLEAEVRKGTFREDLWYRLNIFPITMPPL
RERREDIPLLVNYFIDKISKRLGKSVVMVPVNVMDALRSYHWPGNIRELENVLERAVINS
SGSKLHLADELKKPKKNITNTNRTLADVEREYILRILEKTHWKVSGNNSASEILGLDRST
LRARMRKLDIRKP
NT seq
1482 nt
NT seq
+upstream
nt +downstream
nt
atggaaacaacgtttctggatatttttaattgcattctcggttcgattcgagagccgctg
gtggtgcttgattccgatctgaatgtcgtaaaggccaaccactctttctaccacacgttc
aacgtgaagcccgaacagacagaagggatcttgatttataatctcggcaaccggcaatgg
gatatccccaaactgagagaattactggaaaagatcctccctcagaataccattttcaat
gattttgaagtggaacaccatttcgagaccatcggccaaaagataatgcatctgaatgcc
cggcgaatatacaccgaaagtaaccaaacgcagctgattctattggccatcgaggatgtg
acggagcgtgagtattacaaaagacatcttgaggagatggtcacaaagcgaaccgccgaa
ctcagcgtagccagggaggaggcggaacacagcaaacatctggcagaaaccgccctcgat
gaaataaagcagcttaaaaaccaactcgaggccgagagagcatatcttcaggaagagatc
aagctggaattcaaccatgagaacattatcggccgaagcaacgaaatcaaatacgttttc
tacaaggtcgagcaaatcgccgccacggataccaatgtattggtcctcggcgaaaccgga
acaggcaaggaactggtggcgcgggcgattcacggattgagcgcccgcaaggatcgggcc
ctggtgaaaatgaattgtgccgccctgccttcaaacctcattgaaagtgagctcttcggc
catgagaaaggcgcctttaccaatgcgcattccagacgcttgggacgattcgagatcgcc
aatggcacgaccctgtttctggatgaaatcggcgaactgcccctggacctgcagcccaag
ctgcttcaggtgatcgagaccggcgagtttgagcgcctgggcagctcagaaacgataaac
gtcgatgtgcgcatcattgccgccaccaatcgcaatctggaagcggaagtccgcaagggc
accttccgggaggatctgtggtaccggctgaatatttttccgatcaccatgccgccgctc
agggaacgcagggaagacattcctttgctggtcaattattttatcgacaagatttcaaaa
agactgggaaaatccgttgtcatggttccggtgaatgtaatggacgcgttgcgcagctat
cattggcccggcaatatccgcgaactcgaaaatgtcctcgagcgggcggtgatcaactcg
tcgggttccaaactgcatctggcggatgaactgaaaaaaccgaaaaaaaatataacaaac
acgaatcggacccttgcggacgtggaacgggagtatattctgcgaattctagaaaagacc
cattggaaagtcagcgggaacaacagtgcgtctgaaatcctcggcctcgatcgcagcacc
ttgcgcgcccgcatgcgcaagcttgatatccgcaaaccataa
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