Desulfosarcina ovata subsp. sediminis: DSCO28_37310
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Entry
DSCO28_37310 CDS
T06286
Name
(GenBank) hypothetical protein
KO
K15836
formate hydrogenlyase transcriptional activator
Organism
dov
Desulfosarcina ovata subsp. sediminis
Brite
KEGG Orthology (KO) [BR:
dov00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
dov03000
]
DSCO28_37310
Transcription factors [BR:
dov03000
]
Prokaryotic type
Helix-turn-helix
Other families
DSCO28_37310
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Sigma54_activat
Sigma54_activ_2
AAA_5
HTH_8
PAS_9
PAS_4
PAS
PAS_8
AAA_2
AAA
Mg_chelatase
PAS_10
AAA_16
CCDC90-like
AAA_7
Motif
Other DBs
NCBI-ProteinID:
BBO83165
UniProt:
A0A5K7ZSH6
LinkDB
All DBs
Position
complement(4251161..4252642)
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AA seq
493 aa
AA seq
DB search
MEKTFLEIFNSILDSIRESMVVLDSNLKVIRANPSFYQTFNVNAGQTEGVLIYDLGNKQW
DIPKLRELLEEILPQNTKFNDFEVEHHFETIGRKIMHLNARRIYNETNQPQLVLLAIEDV
TEREYYKRHLEEMVAKRTAELSIAREEAEHSKHLAETALDEIKQLKNQLEAERAYLQEEI
KLEFNHENIIGRSNEIKYVFYKAEQIAATDTNVLVLGETGTGKELVARAIHGLSSRRDRA
LVKMNCAALPSNLIESELFGHEKGAFTNAHSKRLGRFEIADGTSLFLDEIGELPLDLQPK
LLQVIETGEFERLGSSNTIKVDVRIIAATNRNLEAEVRKGAFREDLWYRLNIFPITMPPL
RERREDIPLLVNYFIDKISKRLGKTINMVPVTVMDALRTYHWPGNIRELENVLERAVINS
SGPKLHLVDELKKPKKNLTNTNRTLADVEREYILRILEETHWKVSGNNSAAEILGLDRST
LRARMHKLDIRKP
NT seq
1482 nt
NT seq
+upstream
nt +downstream
nt
atggaaaaaacgtttctggaaatttttaacagcatcctggattcgattcgggagtcgatg
gtggtgcttgattcaaacctgaaagtgataagggccaacccgtctttctaccaaacgttc
aacgtgaacgccggacagacagaaggggtgctgatatatgatctcggcaacaagcaatgg
gacatccccaaactcagagaattgcttgaagagatcctcccgcagaataccaaattcaat
gatttcgaggtggaacaccactttgagaccatcgggcgaaagatcatgcatctgaatgcc
cggcggatatataatgaaacaaaccagccccagctggttctattggccatcgaggatgtg
acggagcgtgaatattacaaaagacaccttgaagagatggtcgcaaagcgaacagccgaa
ctcagtatagccagggaggaggcagaacacagcaaacatctggcagaaaccgccctcgat
gaaataaagcagctaaaaaaccaactcgaggccgagagagcctatcttcaggaagagatc
aaacttgaattcaaccatgagaacattatcggccgaagtaacgaaatcaagtatgtgttc
tacaaggccgagcaaatcgccgccacggataccaatgttttggtcctcggcgaaaccgga
accggtaaagaactggtggcgcgagcgattcacggattgagctcgcgcagggatcgggcc
ctggtgaaaatgaattgtgccgccctgccttcaaacctcattgaaagtgaacttttcggc
catgagaaaggcgcattcaccaatgcgcattccaaacggttggggcgtttcgagattgcc
gatggcacgtccctgtttctggatgagatcggcgagctgcccctggatttgcaaccgaag
ctgctccaggtgatcgaaaccggcgagtttgagcgcctgggcagctcaaacacgataaaa
gtggatgtgcgcatcattgccgccaccaatcgcaatctggaagcagaagtccgcaagggg
gcgttccgggaggatctctggtacaggctgaatatttttccgatcaccatgccgccgctc
agggagcgcagggaagacatccctctgctggtcaattattttatcgataagatttcaaaa
agactgggtaaaaccatcaacatggtcccggtaacggtaatggacgcgttgcggacctat
cattggcccggcaatatccgcgaactcgaaaatgtcctcgagcgggcagtgatcaactcg
tcggggcccaaactgcatctggtggatgaactgaaaaaaccgaaaaaaaatttaacaaac
acgaatcggacccttgcggatgtggaacgggagtatattctgcgaattttagaagagacc
cattggaaagtcagcgggaacaacagtgcggctgaaatcctgggcctcgatcgcagcact
ttgcgggcccgcatgcacaagcttgatatccgcaaaccataa
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