Desulfosarcina ovata subsp. sediminis: DSCO28_37340
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Entry
DSCO28_37340 CDS
T06286
Symbol
groL_2
Name
(GenBank) 60 kDa chaperonin
KO
K04077
chaperonin GroEL [EC:
5.6.1.7
]
Organism
dov
Desulfosarcina ovata subsp. sediminis
Pathway
dov03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
dov00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
DSCO28_37340 (groL_2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
dov03019
]
DSCO28_37340 (groL_2)
03110 Chaperones and folding catalysts [BR:
dov03110
]
DSCO28_37340 (groL_2)
03029 Mitochondrial biogenesis [BR:
dov03029
]
DSCO28_37340 (groL_2)
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
dov04147
]
DSCO28_37340 (groL_2)
Enzymes [BR:
dov01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.1 Enzymes altering polypeptide conformation or assembly
5.6.1.7 chaperonin ATPase
DSCO28_37340 (groL_2)
Messenger RNA biogenesis [BR:
dov03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Chaperones
DSCO28_37340 (groL_2)
Chaperones and folding catalysts [BR:
dov03110
]
Heat shock proteins
HSP60 / Chaperonin
DSCO28_37340 (groL_2)
Mitochondrial biogenesis [BR:
dov03029
]
Mitochondrial protein import machinery
Matrix
Other matrix factors
DSCO28_37340 (groL_2)
Exosome [BR:
dov04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
DSCO28_37340 (groL_2)
Exosomal proteins of other body fluids (saliva and urine)
DSCO28_37340 (groL_2)
Exosomal proteins of breast cancer cells
DSCO28_37340 (groL_2)
Exosomal proteins of colorectal cancer cells
DSCO28_37340 (groL_2)
Exosomal proteins of bladder cancer cells
DSCO28_37340 (groL_2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cpn60_TCP1
divDNAB
Motif
Other DBs
NCBI-ProteinID:
BBO83168
UniProt:
A0A5K7ZSJ1
LinkDB
All DBs
Position
complement(4255386..4257008)
Genome browser
AA seq
540 aa
AA seq
DB search
MAAKEIKYGAKARAKMMKGVDAMADAVMVTLGPKGRNVLINQSWGSPKLTKDGISVAKEI
ELEDRFKNMGAQMVKEAASATSDAAGDGTTTATILARAIYREGAKLTAAGLNPMPIKRGM
DKAVELVVEELKKMSKPTTDKKDIAQVGSISANNDSTIGDLIAEAMEKVGKEGVMTVEEA
KGMETTLTVVEGLQFDRGYLSPYFVTDPEKMTIHMDEPYILMYEGTINTMRDLLPILEQV
AKTGKPILILAENVAGEALTTLVVNKLRGSLHCAAVKSPGFGDNRKATLEDIAILTGGRM
ISEDLGVKLDTISLEDLGTAKRITVDKDNTTIIDGGGDREALKGRTKQLRAQIEATTSDY
DKERLQGRLAKLSGGVAVINVGAATETEMKEKKDRVEDALNATRAAVEEGIVPGGGVAYI
RAMKVLGTARFPDEEQLGVNLIQRALEEPVRQIANNAGFEGAVVIQHVKEGAGSFGFNAE
TGIYEDLMQAGIVDPTKVTRLALQHAASAAGLFMTTEAMIAEKPKKRNTSAPDIPLEDME
NT seq
1623 nt
NT seq
+upstream
nt +downstream
nt
atggcagcaaaagagataaaatacggtgcaaaagcaagggcgaaaatgatgaaaggggtg
gatgccatggccgacgcggtgatggtgacccttgggccgaagggtaggaacgttctcatc
aatcaatcctgggggtctcctaaactcaccaaggacggtataagcgttgccaaggagatc
gaactggaagatcggttcaaaaacatgggcgcgcagatggtcaaggaagcggcttcagcc
acatccgatgcagccggtgacggcaccaccacggcaaccatcctggcccgggccatctat
cgcgagggcgccaagctcacagccgcggggttgaaccccatgcccatcaagcggggaatg
gacaaggccgttgaattggtggtggaagaattgaaaaagatgtccaaacccaccacggac
aaaaaagatatcgcccaggtcggcagcatatcggcaaacaacgactccacgatcggtgac
ctgatcgccgaggccatggaaaaggtgggcaaggaaggagtgatgacggtggaagaagcc
aagggcatggagacgacgttgacggttgttgaaggattgcaatttgaccgtggctatctg
agcccttactttgtcaccgacccggagaagatgacgatccacatggatgagccctatatt
ctcatgtatgaaggaacgatcaacaccatgcgggatctactgcccattttggagcaggtc
gccaaaaccggcaagcccatcctgatcctggcggaaaatgtggccggcgaggcgttgacc
accctggtggtcaacaagctgaggggaagcttgcattgcgcggcggtcaaaagccccggc
tttggtgacaaccgcaaggccacgctcgaagatatcgccatcctgacaggcggccggatg
atcagcgaggatctgggcgtcaagctggatacgatatccctggaagacctgggcacggcc
aaacggatcacggtggacaaggataataccacgatcatcgatgggggtggagatcgcgag
gccctgaaaggacggacaaaacagctcagagcgcaaatcgaagcgaccaccagcgattac
gacaaggaacggctacagggccgcctggcgaaattgagcgggggggtggccgttatcaat
gtgggcgcggccacggagacggaaatgaaagagaaaaaggaccgtgtcgaggatgccctc
aatgccacgagggccgccgtggaggaaggcattgttcccgggggcggtgtcgcttacata
cgtgccatgaaggtgcttggaaccgctcgattccccgatgaagagcagcttggtgtcaac
ctcattcaacgcgccctcgaagaaccggtgcgccagattgccaacaatgccggttttgag
ggcgccgtggtaatccagcacgttaaggaaggcgcggggagttttggattcaacgccgaa
accgggatttatgaagaccttatgcaggccggtatcgtggatccgacaaaagtgacccgg
ctggcccttcaacatgctgcgtccgcggccggccttttcatgaccacagaggcgatgatt
gcggaaaaacccaaaaaaaggaacacctccgcgcccgatatacccttggaggatatggaa
tag
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