Desulfosarcina ovata subsp. sediminis: DSCO28_39880
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Entry
DSCO28_39880 CDS
T06286
Name
(GenBank) 4Fe-4S ferredoxin
KO
K03388
heterodisulfide reductase subunit A2 [EC:
1.8.7.3
1.8.98.4
1.8.98.5
1.8.98.6
]
Organism
dov
Desulfosarcina ovata subsp. sediminis
Pathway
dov00680
Methane metabolism
dov01100
Metabolic pathways
dov01120
Microbial metabolism in diverse environments
dov01200
Carbon metabolism
Brite
KEGG Orthology (KO) [BR:
dov00001
]
09100 Metabolism
09102 Energy metabolism
00680 Methane metabolism
DSCO28_39880
Enzymes [BR:
dov01000
]
1. Oxidoreductases
1.8 Acting on a sulfur group of donors
1.8.7 With an iron-sulfur protein as acceptor
1.8.7.3 ferredoxin:CoB-CoM heterodisulfide reductase
DSCO28_39880
1.8.98 With other, known, physiological acceptors
1.8.98.4 coenzyme F420:CoB-CoM heterodisulfide,ferredoxin reductase
DSCO28_39880
1.8.98.5 H2:CoB-CoM heterodisulfide,ferredoxin reductase
DSCO28_39880
1.8.98.6 formate:CoB-CoM heterodisulfide,ferredoxin reductase
DSCO28_39880
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Pyr_redox_2
Fer4_20
FAD_oxidored
NAD_binding_8
Pyr_redox_3
DAO
Pyr_redox
GIDA
FAD_binding_2
Thi4
HI0933_like
Fer4
Fer4_10
FAD_binding_3
NAD_binding_7
Fer4_7
Fer4_21
NAD_binding_9
Fer4_9
Fer4_6
Fer4_2
Amino_oxidase
Fer4_17
Fer4_4
Fer4_16
Fer4_8
MurD-like_N
MCRA
Fer4_15
Motif
Other DBs
NCBI-ProteinID:
BBO83422
UniProt:
A0A5K7ZTA4
LinkDB
All DBs
Position
complement(4531224..4535696)
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AA seq
1490 aa
AA seq
DB search
MSDKANPQDKDVVGSVLVVGGGIAGIQASLDLADSGYFVHMTETKSAIGGVMAQLDKTFP
TNDCSMCIISPKLVECGRHLNIDLMTLTEIEDVSGEVGNFTVKLRQNARYIEMDKCTACG
ECAKACPIETPNLFDEGLRERKAAFKLYPQGMPSAYAIDKRGTAPCKATCPAHVSIQGYI
ALINDGRYKEALKLFKKDHPFPGVCGRVCHHPCEGECSRNDVDQPLAIRELHRFLADFEK
QSGETYIPEITAEKRGENVAIIGSGPAGITAAYFLLQQGYGVTIFEKMSEPGGMMRYGIP
EYRMPRDILAGEIDVVRQMGAEIRCGVAFGSDVTLESLKADGYSACFMAIGLHGGRRLGV
DNEDVEGVLQGVDFLREAAMGKDFDLGEDVIVVGGGNVAVDVALTAKRKGAKNVTLICLE
KREEMPAWEHEIEEALESDIRIVNSFGPKSFFIDKNQRVSGIEFKTCTAVFDGSGRFNPS
YDDNECQPFFGDTVIVAIGQSTNLDGIKEQGIAISRPGGLEADPVTLQTPIDWVFAGGDA
FYGPKSVVDAVSCGKEAAESIHRFINGLDLTEGRPKEWDFYKPDVSEEPKKPRTMVRCLD
PEARECNFLEVSYGFNEKEAKNEAQRCLKCGLCSECYQCVDACLAKAVNHDMVAEYRTIN
VGAIILAPGFTPFDPTAHKTYAYASHPNVVTSLEFERILSASGPFEGHLMRPSDHKEPDK
IAWLQCVGSRDINCSDHSYCSSVCCMYTNKQTVIAKEHSGKPLDTAVFFMDMRTHGKEFE
KYYMRTREEKGVRYIRSKVHTIDPVESDNLRLRYVTEEGEIKEEDFDMVVLAVGLAPNKE
SMNLAKTMGIDLNKHLHAATKALDPVASSRPGIFVCGAFQEPKDIPQSVMEASAAASTAT
SPLAEARGSLIRTKELPPEIDVSGQEPRIGVFVCNCGINIGGVADVPAVREYARTLPHVV
HVEDNLFTCSQDTQDKMKEVIKENDINRVIVASCSPRTHEPLFQETIRDAGLNRYLFEMA
NIRDQNTWVHMNNPERATEKAKDLVRMAVAKAAYIEPLHQVRLAVVQKVLVVGGGVSGME
AALGVADQGLPVFLAERGNYLGGVAHNLVSTWQGEPVAPYLDDLIEKVRSHANIRVFMKT
EPVETTGGMGNFTTTLMTSGETLTETVVEHGATILATGGKEYLPTEYLYGENPDVLTHFE
LDAMLKSDDERLAKAGSVAFIQCVGSRTPERPYCSRLCCTHTVKSALSLKARNPEIDIYV
LYRDMRTYGFREELYKEAREKGVIFMRYNLEDNVPDVGTANDGRLSVKVRDHVLQMPVEI
NPDLLVLATAVLPNENKDLFDLFKVPINADGFLVEAHAKLRPVDFGSEGIFMAGLAHYPK
PLDESIAQARASVSRVMTILSQDAIWVGGVVAEVDPEKCAVCVTCVRTCPYHIPYIGEEG
HAVIDPAECHGCGCCVSECPGKAIQLKHFTDEQIVAKTAALFEKQKGQAA
NT seq
4473 nt
NT seq
+upstream
nt +downstream
nt
atgtcagacaaagcaaacccccaagataaggacgtcgtcggttccgtactggtggtcggt
ggcggcatcgcgggcatccaggcgtccctggacctggccgattcgggctacttcgtccat
atgaccgaaaccaaatcggccatcggcggtgtcatggcccagttggacaaaaccttcccg
accaatgactgctccatgtgtatcatttctcccaaactggtcgagtgcggacgccatctc
aacatcgacctgatgaccctgaccgagatcgaggacgtgagcggcgaggtgggcaatttc
acggtcaaattgcgtcagaacgctcgctacatagaaatggacaaatgcacggcctgcggc
gagtgcgccaaagcctgtcccatcgaaacgcccaaccttttcgatgaaggtctgcgcgag
cgcaaggcggccttcaagctctacccccagggcatgcccagcgcatacgccatcgacaaa
cgcgggaccgccccgtgcaaggccacctgcccggcccacgtgagtatccaggggtatatc
gccctgattaacgacggccgctacaaggaagccttgaagcttttcaaaaaagaccaccct
ttccccggcgtttgcggccgggtctgccatcatccctgtgaaggcgaatgttcacgcaac
gatgtcgatcagccactggccattcgcgagctgcaccgttttctcgccgatttcgagaag
cagagtggagagacctacatccccgagattacggctgagaaacggggcgagaacgtcgcc
atcatcggctccggcccggcgggaatcacggcggcctacttcctgcttcagcagggctac
ggggtgaccattttcgagaagatgtccgaaccggggggcatgatgcgctacggcattccc
gaataccggatgccccgtgacatcctggctggagagatcgatgtggttcgacagatgggc
gcggaaatcagatgcggggtggcttttggatcggatgtcaccctggagagtctcaaggcc
gacggctacagtgcctgtttcatggccatcggcctgcacggcggccgccgcctgggcgtt
gacaacgaggatgtcgaaggcgtgctgcaaggcgtcgatttcctgcgtgaagccgccatg
ggcaaggatttcgacctgggtgaggatgtcatcgtggtgggcggcggcaacgtggccgtc
gacgtggccctgaccgccaagcgcaaaggcgccaagaacgttaccctgatctgcctggaa
aaacgcgaggagatgcccgcctgggagcacgagattgaggaggccctggaaagcgacatc
cggatcgtcaacagcttcggtcccaaatccttttttatcgacaagaaccagcgggtgtcg
ggaatcgaattcaagacctgtacggcggtgttcgacgggagcggacgtttcaacccgagt
tacgatgacaatgaatgccagcccttcttcggagacaccgttatcgtcgccattggtcag
agcaccaacctggatggcatcaaggagcagggcattgcgatttcgcggcccggcggcctg
gaagccgacccggttaccctgcagacgcccattgactgggtatttgccggcggcgacgcg
ttctacggccccaaatcggtggtcgatgcggtctcctgcggcaaggaggccgccgagagc
atccaccgcttcatcaacggtctggatctgaccgaaggccgcccgaaggaatgggatttt
tacaagcccgatgtgagcgaagaacccaagaaaccgcgtaccatggtgcgctgcctcgat
cccgaggcccgggaatgcaactttctggaggtttcctacgggttcaatgaaaaggaggcc
aaaaacgaggcccaacgctgcctcaagtgcggtctctgctcggagtgctaccagtgcgtg
gatgcctgtctggccaaggcggtgaatcacgatatggtggccgaatacaggaccatcaac
gtgggtgccatcatcctggcaccggggtttacgccgttcgatcccacggcccacaagact
tatgcctacgccagccatcccaacgtggtgaccagcctggagttcgagagaattctcagc
gcctcgggcccgttcgaggggcacctgatgaggccgtccgaccacaaggaaccggacaag
atcgcatggctgcagtgtgtcggttcccgcgatatcaactgctccgaccacagctactgc
tcgtcggtgtgctgcatgtacaccaacaaacagacggtgatcgccaaggagcacagcggc
aagcccctggacacggccgtcttttttatggacatgcgtacccatggaaaagagtttgag
aagtactacatgcgtacgcgtgaggaaaagggtgtgcgctatatccgttccaaggtgcac
accatcgatccggtcgagagcgacaacctgcgcctgcgctacgtgaccgaagagggagaa
ataaaggaagaggatttcgatatggtcgtcttggccgtcggcctggcgcccaacaaggaa
tcgatgaacttggccaagaccatggggatcgaccttaacaagcacctgcacgcggcgaca
aaggccctcgatccggtcgcctccagtcgtccgggtattttcgtctgcggggccttccag
gagcccaaggatatcccccaatcggtcatggaggcctctgccgcggcgtccacggccacc
agcccgctggccgaggcccggggatcgctgattcgcaccaaggaactgccaccggagatc
gatgtctccggccaggagccgcgaatcggcgtttttgtctgcaactgcggaatcaacatc
ggcggggtggccgatgtgccggcggtgcgggagtatgcgcggaccctgccccatgtggtg
catgtggaagacaatctttttacctgcagccaggacacccaggacaagatgaaagaggtg
atcaaggagaacgacatcaaccgcgtgatcgtggcctcctgttcaccccgtacccacgaa
ccgctgttccaggagaccatccgcgatgccggcctgaacagatacttgttcgaaatggcc
aatatccgtgaccagaacacctgggtgcacatgaacaaccccgagcgggcaaccgagaag
gccaaggacctggtgcgcatggccgtggccaaagccgcctatatcgaaccgctgcatcag
gtccgcttggccgtcgttcagaaggtgctggtggtcgggggaggcgtctccggcatggag
gcggcactcggggtcgccgaccagggacttccagttttcctcgcggagcggggaaattac
ctgggtggcgtggcccataacctggtttccacctggcagggcgaaccggtggccccctat
ttggacgatctgatcgagaaggtccgcagccatgcgaacatccgggttttcatgaaaacg
gaaccggtggagaccaccggcggcatgggaaacttcactaccactctgatgacctcgggg
gagaccctgaccgagaccgtggtggagcacggggccaccatccttgccaccggcggcaag
gagtacctgcccaccgagtacctctacggagagaaccccgatgtactgacccatttcgaa
ctcgatgcgatgctcaagtccgatgacgagcggctggccaaggccggcagtgtggccttc
atccagtgtgtcggctcacgaactcccgagcggccctactgcagccggctttgctgcacc
cacacggtaaaaagtgcattgagcctcaaggcgcgcaatccggagatcgacatctatgtc
ctttaccgggatatgcggacctacggcttccgggaagagctgtacaaggaagcgcgcgaa
aagggcgtgatttttatgcgttacaatttggaggacaacgttcccgatgtcggcaccgcc
aacgacggccggctcagcgtaaaggttcgggatcatgtcctgcagatgcctgtggagatc
aacccagatctgttggtactggccacggcggtactgcccaacgagaacaaggacctcttc
gacctgttcaaggtgcccatcaatgccgacggcttcctggtggaggcgcatgccaaactg
aggccggtggacttcggctccgaggggatcttcatggccggcctggcccactaccccaag
cccctggacgaaagcatcgcccaggcccgcgcatcggtttcccgggtcatgacgatcctt
tcgcaggatgccatctgggtgggcggcgtggtggccgaggtggatccggaaaagtgcgcg
gtgtgcgtcacctgtgtgcgcacctgcccctatcacattccctatatcggcgaggaaggc
cacgcggtgatcgatcctgccgaatgtcatggctgcggctgctgcgtttccgaatgtccg
ggcaaggcgattcagctcaagcatttcaccgatgagcagatcgtggccaaaaccgcggca
ctgtttgagaagcagaaggggcaggcggcctga
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