Desulfosarcina ovata subsp. sediminis: DSCO28_41040
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Entry
DSCO28_41040 CDS
T06286
Symbol
rimO
Name
(GenBank) ribosomal protein S12 methylthiotransferase RimO
KO
K14441
ribosomal protein S12 methylthiotransferase [EC:
2.8.4.4
]
Organism
dov
Desulfosarcina ovata subsp. sediminis
Brite
KEGG Orthology (KO) [BR:
dov00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
dov03009
]
DSCO28_41040 (rimO)
Enzymes [BR:
dov01000
]
2. Transferases
2.8 Transferring sulfur-containing groups
2.8.4 Transferring alkylthio groups
2.8.4.4 [ribosomal protein uS12] (aspartate89-C3)-methylthiotransferase
DSCO28_41040 (rimO)
Ribosome biogenesis [BR:
dov03009
]
Prokaryotic type
ribosomal protein modification factors
DSCO28_41040 (rimO)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UPF0004
Radical_SAM
TRAM_2
TRAM
CobT
Motif
Other DBs
NCBI-ProteinID:
BBO83538
UniProt:
A0A5K7ZTK7
LinkDB
All DBs
Position
complement(4657774..4659096)
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AA seq
440 aa
AA seq
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MMVYIESLGCARNQVDSETMAGQLRLDGWTLTRDPAEAEVIVVNTCSFVEAAINESIDTV
LELARFKTDGRCQRLIVAGCLPERFREAIADALPEVDQFLGTGAYTQIGDAVTGRLDGNV
CLPDPDRIPMGASALREREQTTSAYLKIAEGCSRHCTYCIIPRLRGRQKSRPMAQILEEA
RQLIDAGAREINLVAQDTTHYGHDRSEPARFADLLAKLAALAGDTWIRFLYGHPESIDDA
VLQVVAAHDNLCPYFDLPVQHASKTVLKKMGRGYDKDRLLELFRRIRTTVPGAVLRTTLI
VGFPGESDADFKTLMDFVEAVRFDHLGVFTYSDAEDLPSHRLSGHVSKKVAQARHDAIMA
RQMAISADNLTAMIGRTLPVLVEAVAEPGLYEGRSILQAPEVDGLTYVRTPPDGPALPIG
EIVRVQISETLEYDLIGRVR
NT seq
1323 nt
NT seq
+upstream
nt +downstream
nt
atgatggtatatattgaaagtctgggctgcgcccgcaatcaggtagacagcgaaaccatg
gccgggcaactgcgcctggacggctggacgttgacccgggatccggccgaagcagaggtg
attgtggtcaacacctgcagttttgtggaggcggcgatcaacgaatccatcgatactgtt
ctggagctggcgcggtttaaaaccgacggccgctgccagcgactgatcgtggctggatgc
ctgccggaacggtttcgcgaggccattgccgatgccttgcccgaggtggatcagtttctg
ggaaccggtgcctatacccaaatcggcgatgccgtgaccggacggctggacggcaatgtc
tgcctgccggacccggaccgcattcccatgggcgcgtccgccctgcgggagcgggagcag
acgaccagcgcgtacctgaaaatcgccgaagggtgcagccgccactgcacctactgcatc
attccgcggctgcgcggtcgccagaagagccggcccatggcgcagatcctggaagaggcc
cggcaactgatcgatgccggtgcccgggagatcaatctggtggcccaggacaccacccat
tacggccacgaccgatccgaaccggcacggtttgccgatctgctggcaaagttggcggcg
ttggccggcgatacctggattcgcttcctgtacggccacccggagagcattgacgatgcg
gtgctgcaggtggtcgccgcccacgacaatctgtgtccctattttgatctgccggttcag
catgcctcgaaaacggtgctcaagaaaatggggcgcgggtatgataaagaccgccttctg
gaactgttccggcgcattcgcaccacggttcccggggccgtcctgcgcaccaccctgatc
gttggctttcccggcgagagcgatgccgatttcaaaaccctgatggattttgtggaggcg
gtacgcttcgaccatctgggggtgtttacctattccgatgccgaggacctgccgtcccac
cggctttccggccacgtttccaaaaaagtggcccaggcgcgccatgacgcgatcatggcg
cggcagatggcgatctcggccgacaacctgaccgccatgatcggaagaaccctgccggtg
ctggtcgaagcagtggccgaacccggcctttacgaagggcggtccatcctgcaggccccc
gaggtggacggactgacctatgtccgaacgccgcccgacggaccggcattgcccattggc
gagatcgtgcgggttcaaattagcgaaaccctggaatacgacctgatcggaagggtacga
tga
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