Desulfosarcina ovata subsp. sediminis: DSCO28_41780
Help
Entry
DSCO28_41780 CDS
T06286
Name
(GenBank) ligand-gated TonB-dependent outer membrane channel
KO
K16092
vitamin B12 transporter
Organism
dov
Desulfosarcina ovata subsp. sediminis
Brite
KEGG Orthology (KO) [BR:
dov00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
dov02000
]
DSCO28_41780
Transporters [BR:
dov02000
]
Other transporters
Pores ion channels [TC:
1
]
DSCO28_41780
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Plug
Motif
Other DBs
NCBI-ProteinID:
BBO83612
UniProt:
A0A5K7ZTT4
LinkDB
All DBs
Position
complement(4748190..4749911)
Genome browser
AA seq
573 aa
AA seq
DB search
MVTATRSPVCEDQTTANVTVITAEEIERLPATNVAEVLQYLPGVFVEIDSGPGSPANGIS
IQGCETRHVAVYQDNVPLEMMANPQTDLAYLPVDNIEKIEVVKGVASAAWGSSLGGVINI
ITKDPDRKKPLSIDATGSCGENHTRRIRAGVSGFKGQLGWLVSGVHEKSDGFFDHSEYRQ
NGGYAKLDYGVGQTGQVRFVAFSNTGRDAEWLPDEPDFWDDREQRRAYQTLSFETAPTDA
TILTVELRHHRYETRVDDVYVDHRELYSDYEDELWGGSARMQWAAPRHHAVTAGCDIDWG
KYDWTYYQEAYDTRNWAVWVNDTIAMGPVHVNAGLRYDDNFNFGNELSPSLGAVYPFSRY
DALIRAQVSRGFSAPPASLVNDPTYGNPDLKAETAVNYQIGGQIQPNRYFKVELTFFRAD
VDDLITYNYETERHQNIETVTRQGIEGGVSVFSDFGLAFHFGGTYVDVFNEKTDERIEDI
PKLIYTARVLYTGGRFTHTLVGRMVDHNSSFPETRDKRFVWDYKLTFRLPTSTSYGRYKL
FANIHNLTDSDYIVRPNWPKPGRWVEGGLQFVF
NT seq
1722 nt
NT seq
+upstream
nt +downstream
nt
gtggtgaccgccacccggtctccggtttgtgaggatcagaccaccgccaacgtgaccgtg
atcacggccgaggagattgaacgtctgccggccaccaatgtcgccgaggtgctgcagtac
ctccccggggtatttgtggaaatcgacagcgggcccggaagtccggctaatggaatcagt
attcaagggtgcgagacaaggcacgtggccgtgtaccaggacaatgttcccctggaaatg
atggccaacccgcaaaccgatctggcttatctgcccgttgataatatagaaaaaatagag
gtggtcaagggggtggcatcggccgcctggggctcttcgctgggaggcgtgatcaacatt
atcaccaaggaccctgaccggaaaaagcccctttccatcgatgccaccggttcctgcggc
gaaaaccatacccgtcggatccgggccggcgtcagcggtttcaagggacaattgggctgg
ctggtgtccggtgtgcatgaaaagagcgacggattctttgaccattccgaatatcgtcag
aacgggggatacgccaaactcgattatggtgtgggccaaaccggccaggtccgtttcgtc
gccttttccaataccgggcgagacgccgagtggttgccggacgagccggatttctgggat
gaccgggaacagcggcgggcctaccaaaccctgtctttcgaaaccgctccgaccgatgcg
acgatcctgaccgtggaactgcggcaccatcgatacgaaacacgagtcgacgatgtgtat
gtcgatcatcgggaactctacagtgattatgaagatgagttgtggggaggaagcgcccgc
atgcaatgggcagccccaaggcatcatgcggtgaccgccggatgcgatatcgattggggg
aagtatgattggacctattaccaggaagcctatgacacccgaaattgggcggtctgggtc
aacgacaccatcgccatgggaccggtccatgtcaacgccggcctgcgttatgacgacaat
ttcaatttcggaaacgaactcagcccctcccttggcgcggtttacccgttttcgcgatac
gatgcattgatccgagcccaggtgtcccggggattttcggcgccgccggcgtccttggtc
aacgatcccacctatgggaatccggaccttaaggcggaaacggccgtcaattatcagatc
ggcgggcagattcagccgaaccggtatttcaaggtcgagcttacttttttccgggccgat
gtggacgacctgatcacttacaattacgaaaccgagcggcatcaaaacatcgaaacggtg
acccgccagggaatcgaaggcggtgtcagcgtattttcggatttcggtttggcgttccat
ttcggcggcacttacgtggatgttttcaacgagaagaccgacgagagaatcgaggatatt
ccgaaactgatctatacggcgcgagtcctgtacacagggggacgcttcacccacacgctg
gtgggtcggatggtcgaccacaattccagttttccggaaacccgggacaagcggttcgtc
tgggattacaagctcacgtttcgcctgcccacgtcaacatcatacggtcgatacaagctg
ttcgccaatatccataacctgaccgattccgactatatcgtccgccccaactggcccaaa
ccggggcgctgggtggagggggggctgcagtttgttttttga
DBGET
integrated database retrieval system
