Desulfosarcina ovata subsp. sediminis: DSCO28_42190
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Entry
DSCO28_42190 CDS
T06286
Name
(GenBank) hypothetical protein
KO
K20276
large repetitive protein
Organism
dov
Desulfosarcina ovata subsp. sediminis
Pathway
dov02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
dov00001
]
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
DSCO28_42190
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SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
K319L-like_PKD
Sde0182_C
PKD_4
Big_9
REJ
Cadherin_4
Motif
Other DBs
NCBI-ProteinID:
BBO83653
UniProt:
A0A5K7ZTW0
LinkDB
All DBs
Position
complement(4797155..4802512)
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AA seq
1785 aa
AA seq
DB search
MRIIVIVLSLLIGSISMIDPVRAESTYATSVVDYDAYFMNWDGTNGFYHNPVDAYPDAGA
DLDWLLGGVDETVAAGWGGDAEGGTLTLYYDTAFTADGTDAADIVVHGFGFAYNTPFSTE
KGAMRVFASADGENWTVISDYVGYDNGDTWEANPDFTESNPGVPSVIMEIDLDDDISNTY
AGPISYLKFELGDGETGHGRAFFTSAIEGVTAYQASTAPTADAGADQTVDEGEAVTLDGS
DSSDPDGDALSYQWVQTDSSGYDVSLSDATSATASFTAPEVAADGAVLIFQLTVTDSGGL
DATDTVRISIVSENQSPTADASDDQTVGEGTLVSLDGSGSSDPDGDALSYQWVQTDSSGY
DVSLSDATSATASFTAPEVAADGAVLIFQLTVTDSGGLDATDTVRVSIVSENQSPTADAS
ADQTVGEGTLVSLDGSGSSDPDGDALSYQWVQTDSSGYDVSLSDATSATASFTAPEVAAD
GAVLIFQLTVTDSGGLDATDTVRVSIVSENQSPTADASADQTVGEGTLVSLDGSGSSDPD
GDALSYQWVQTDSSGVSVSLSDADTATPSFTAPDVAADGASLTFELTVTDTCDLADTDTV
IINIEFVNQSPTADAGADQTVDEGEAVTLDGSGSSDPDGDALSYQWVQTDSSGYDVSLSD
ATSAKASFTAPEVAAASAVLIFQLTVTDSGGLDATDTVRVSIVSENQSPTADAGADQTVD
EGEAVTLDGSGSSDPDGDALSYQWVQTDSSGVSVSLSDADTATPSFTAPDVAAGEASLTF
ELTVTDTCDLADTDTVIINIEFVNQSPTADAGDGQTVTEGDTVSLDGSGSSDPDGDTLSY
QWVQADSSGYNVSLSNADSAAPSFTAPDVDADSASLTFTLTVTDTGGLSGTASVIITVGD
ADTSSDSVFATAVIDYGAYPASVPDDGIFMNWDNTEGFYHNEVTAYPDAGANLDWLLGEV
DESQAAGWGGDANGGYLILYFDTAFTADGTDAADIVVYGFGYAYNTPFTSEKGAITVSVS
ADGENWTVVSDYEGYANGDVWEANPDFTESSPGVQSVIMQIDLDDAISHTYDGAISYLRF
ELGDGTEGHGRAFFVNAVEGGEMNVAPMAEAGISQEVDPGAEVTLDGTGSEDIDDGIATY
AWTQVEASAAITVILDDATSPAPTFTAPDAPGESLTFELTVTDYAGQSDTDTVAITIIKA
SDITDYYATGVAEESGCISWEEQAADGGENALGLPDYVPDSEGDCSGWDSGTGYLVVKFN
NPLEDTDGLDDLAIAHCGTGETEILASADGQAWTSLGTLPAGSDACEEVAYTAYDFSDAD
IDDVQYIKIEKTGSSARFIDAVFVPVRVYGATAEDTDDEYPDGCVDWVAKQADDGENALG
EPDYDDSTAGIGNCSGWMVEAGRITIGFDKPFFDGQGDDLNVYHFGRGGANVQASTDGLE
WISLGELPAGINGGSQLDTAGYDLADAGITWIQYVRINKTQVGYTYGRFIDAVEGIYGIP
GATGAAGRDQTVTEGTAVTLGADADDDDSESVAYTWKQTGGLSVALSDDNAKNPQFIAPM
IDGGKTELRFTVARTEDSTETEDEVRIVVVDNGMTLSATEEDHFSEAEIVFNNDVGADNL
DWTACNMGLSCEGGSVVFYEAQDPDSTLSSDYIDDFEDRPKNILYGLLAVDVKTDVIGGT
AVVSVFLPEAAGSDYCWYKYSEDLGWIDFSRNALSDDSDNGAEFNADRTVVTLTLTDGGP
YDDDGLANGIVKDPSGLADATTVNAWHDEGGGGCFIGTALPQSKY
NT seq
5358 nt
NT seq
+upstream
nt +downstream
nt
atgagaatcattgttatcgttctgtcacttcttattggttcgatctcgatgatcgatccg
gtccgggcggaatccacctatgccacgtcggtggtggattacgacgcctatttcatgaac
tgggatggtaccaacggtttttatcacaatccagtagatgcctatcccgatgccggggcc
gatctggactggctcctgggaggggtggacgagaccgtggccgccggctggggcggggat
gccgaaggcggaacattgacgctttactatgatacggcttttactgctgacggtaccgac
gcggctgacatcgtcgtgcatggattcgggtttgcctacaacacgccgttttcaacagag
aaaggggcaatgcgggtattcgcctcggccgacggtgagaactggaccgtgatttcggat
tatgtcggctacgacaacggggacacctgggaggccaacccggattttaccgaatcgaac
cccggggtgccgtccgtgatcatggaaatcgatttggacgacgacatctccaatacttac
gccgggccgatttcctacctcaaattcgagctcggcgacggagagaccgggcatggccgg
gcctttttcaccagtgccatcgagggggtcactgcctatcaggccagtaccgctcccacg
gccgatgccggtgccgaccagacggtcgacgaaggggaggcagtgactctggacggcagc
gactcatcggatcccgacggggatgcgctgagctaccaatgggtgcagacggatagcagc
ggatacgatgtgagcctgtccgatgcgacatcggcgacagcgtccttcaccgctccggaa
gtggccgccgatggcgcggtcctgattttccaactgaccgtgaccgattcgggggggctc
gacgcgacggatacggtcaggatcagcatcgtttccgaaaaccagtcccccacggccgat
gccagtgacgaccagacggtgggcgaaggcacgctggtgagcctggacggcagcggctca
tcggatcccgacggagacgcgctgagttaccaatgggtgcagacggatagcagcggatac
gatgtgagcctgtccgatgcgacatcggcgacagcgtccttcaccgctccggaagtggcc
gccgatggcgcggtcctgattttccaactgaccgtgaccgattcgggggggctcgacgcg
acggatacggtcagggtcagcatcgtttccgaaaaccagtcccccacggccgatgccagt
gccgaccagacggtgggcgaaggcacgttggtgagcctggacggcagcggctcgtcggat
cccgacggggatgcgctgagctaccaatgggtgcagacggatagcagcggatacgatgtg
agcctgtccgatgcgacatcggcgacagcgtccttcaccgctccagaagtggccgccgat
ggcgcggtcctgattttccaactgaccgtgaccgattcgggggggctcgacgcgacggat
acggtcagggtcagcatcgtttccgaaaaccagtcccccacggccgatgccagtgccgac
cagacggtgggcgaaggcacgctggtgagcctggacggcagcggctcgtcggatcccgac
ggggatgcgctgagctaccaatgggtgcagacggatagcagcggggttagcgtaagcctg
tcggatgcggataccgcgacgccttccttcaccgcgccagacgtagccgccgacggggcg
tcgttgaccttcgaactgaccgtgacggacacctgcgaccttgccgatacagatacggtc
attatcaacattgaattcgtcaaccagtcccccacggccgatgccggtgccgaccagacg
gtcgacgaaggggaggcagtgactctggacggcagcggctcatcggatcccgacggagac
gcgctgagctaccaatgggtgcagacggatagcagcgggtacgatgtgagcctgtccgat
gcgacatcggcgaaagcatccttcactgctccggaagtggccgccgccagcgcggtcctg
attttccaactgaccgtgaccgattcgggggggctcgacgcgacggatacggtcagggtc
agcatcgtttccgaaaaccagtcccccacggccgatgccggtgccgaccagacggtcgac
gaaggggaggcagtgactctggacggcagcggctcatcggatcccgacggggatgcgctg
agctaccaatgggtgcagacggatagcagcggggttagcgtgagcctgtcggatgcggat
accgcgacgccttccttcaccgcgcccgacgtagccgccggcgaggcgtcgttgaccttc
gaactgaccgtgacggacacctgcgaccttgccgatacagatacggtcattatcaacatt
gaattcgtcaaccagtcccccacggccgatgccggcgacggccagacggtaaccgaaggg
gacacggtgagcctggacggcagcggttcatcggatcccgacggtgatacgctgagctac
caatgggttcaggcggactccagcgggtataacgtgagcctttcaaatgcggatagcgcc
gcgccttccttcaccgcgcccgacgtggatgccgacagcgcgtcgctgacctttacgttg
accgtgacggataccggcggcctcagcggcaccgcttccgtgatcattaccgtcggtgat
gcggacacttcttccgattccgtttttgcgacggcggtgatcgactatggggcctatccg
gcgagcgtacccgatgacggtattttcatgaactgggacaacaccgagggtttttatcac
aacgaagtcaccgcttaccccgatgccggggcgaatctggactggcttttgggggaagtc
gacgaaagccaggccgccggctggggcggggacgccaacggcggctatctgatcctttat
tttgatacggccttcaccgccgatggcaccgatgcggccgacatcgtcgtttatggcttc
ggctacgcctacaacacgccttttacctccgagaaaggcgccattaccgtatcggtttcg
gctgacggcgaaaactggaccgtggtttccgattacgaggggtatgccaacggcgatgtc
tgggaggccaatcccgattttaccgagtcgtctcccggtgtgcaatccgtcatcatgcag
attgacctggacgatgccatctcccacacctacgatggcgcgatctcgtacctcaggttc
gaactgggcgacggtaccgagggtcacgggcgggcctttttcgtcaatgcagtggaaggc
ggagagatgaatgtcgctcccatggccgaagccggcatcagccaggaagtcgaccccggc
gccgaggtgaccctggacggcaccggttccgaggatatcgatgacggcatcgctacctat
gcctggacccaggtcgaggccagcgccgcgataacggtgatcctggacgacgccaccagc
ccggcaccaaccttcaccgcgccggacgcccccggcgaatcgctcacctttgaattgacc
gtgaccgattatgccgggcagtccgacacggacacggtggcgattaccatcatcaaagca
tccgacatcaccgattattacgccaccggcgtggcggaggaatccggctgcatttcctgg
gaagagcaagctgccgatggcggagagaacgccctgggcctgcccgattatgtaccggat
tctgaaggcgattgttccggctgggatagcggcaccggttatctggtggtcaaattcaac
aatcccttggaagacaccgacggtctggacgatttggccatcgctcactgcggaaccggt
gagacggagattttggccagtgccgacggccaggcctggaccagcctgggcactctgccg
gccggttcggacgcctgcgaagaagtggcctacaccgcctatgatttcagcgatgcggac
atcgacgacgttcaatacatcaagatcgaaaaaacaggatcctcagcgcggtttatcgat
gcagtattcgtcccggtccgggtttacggcgccacggccgaggataccgacgacgaatat
ccggacggctgcgtggattgggtggccaagcaggccgatgacggcgagaacgccctgggc
gaaccggattacgacgacagcaccgccggcatcggcaactgctccgggtggatggtcgaa
gcgggacggatcaccatcggtttcgacaagccctttttcgacggccagggtgacgacctg
aacgtctaccatttcggccgcggcggggccaatgtgcaggccagtacggacggcctcgaa
tggatcagcctcggcgaactgccggcgggtatcaacggcggcagccagctggatacggcg
ggctacgatttggccgatgccgggatcacctggattcagtatgttcggatcaataagact
caggtgggatatacctatggccgtttcatcgatgcggtggagggcatctacggtattccc
ggagccacgggtgccgcgggccgggatcagaccgtgaccgagggcactgccgtgacgctc
ggcgcggatgcggatgatgacgattctgagtcggtggcctacacatggaagcaaacggga
gggttatcggttgccctttccgatgacaacgcaaagaatccacaattcatcgcccccatg
atcgacggcggaaaaaccgagctgcgcttcacggtggcccgcaccgaagattccactgaa
accgaggacgaggttcgcatcgtcgtcgtggataacggcatgaccctgtcagccaccgaa
gaagaccatttttcggaggccgagattgtatttaacaacgacgtgggggcggacaatctg
gactggaccgcctgcaacatgggcctttcctgtgagggcggcagcgtcgtcttctacgag
gcccaggaccccgacagcaccctttcttcggattatatcgacgatttcgaagatcgcccc
aagaacatcttatatggccttttggccgttgacgtcaaaacggacgtaattggcggcacg
gctgtcgtttccgtgtttttgccggaagccgccggaagcgattactgttggtataaatac
agcgaagacctgggttggatcgatttcagccgcaatgccctgtccgacgatagcgacaac
ggcgccgaattcaacgcggaccgtaccgtcgtgaccctgaccctgacggacggcgggccg
tacgacgacgacggccttgccaacggaatcgtcaaagacccatcggggctggccgacgcg
accacggtgaacgcctggcacgacgagggcggcggggggtgtttcatcggtaccgctttg
cctcaatccaaatattga
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