Desulfosarcina ovata subsp. sediminis: DSCO28_42230
Help
Entry
DSCO28_42230 CDS
T06286
Name
(GenBank) cation ABC transporter substrate-binding protein
KO
K09815
zinc transport system substrate-binding protein
Organism
dov
Desulfosarcina ovata subsp. sediminis
Pathway
dov02010
ABC transporters
Brite
KEGG Orthology (KO) [BR:
dov00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
DSCO28_42230
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
dov02000
]
DSCO28_42230
Transporters [BR:
dov02000
]
ABC transporters, prokaryotic type
Metallic cation, iron-siderophore and vitamin B12 transporters
Zinc transporter
DSCO28_42230
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ZnuA
Isochorismatase
DUF4153
GKAP
DUF4627
Motif
Other DBs
NCBI-ProteinID:
BBO83657
UniProt:
A0A5K7ZTW5
LinkDB
All DBs
Position
complement(4807115..4808080)
Genome browser
AA seq
321 aa
AA seq
DB search
MIRLIMRIFFTCALFFIFIGSGDAAERIPVFVSIVPQKFFVQQIGKDLVSVQVMVQPGAS
PATYEPKPKQMAALSKAAIYFSIGVPFENAWLSKFSAANPGMTVVATDHDIKKLPMATHH
HDEEHGNHEAAGPHHEADHDHDKDAHHSEEEPGEDHHAHGALDPHVWLSPPLVKIQAHSI
MTALQTIDPAHGSIYAENYRHFASTIDELDTQLKQTFAGRQGLQFMVFHPAWGYFAHAYG
LQQVPIEIEGKDPKPAQLQRLIEHARESKINVIFVQPQFSTKSAGQIAEAIHGQVLPADP
LAEDWTGNLRMVAEKFKAALR
NT seq
966 nt
NT seq
+upstream
nt +downstream
nt
atgatacgcttaataatgagaatattttttacatgcgcgctgttctttatttttattggc
agtggagatgcggcggagagaattccggttttcgtcagcatcgttccacagaaatttttt
gtgcaacaaattggcaaggacctggtttctgtccaggtcatggttcagcccggtgccagt
cccgccacctacgagcccaaacccaagcagatggccgcgctttcaaaggccgccatctat
ttttccatcggcgtgccgtttgaaaatgcctggctgagcaagttctcggccgccaatccc
ggcatgacggttgtggccacggatcacgacatcaagaagcttcccatggccacccatcat
cacgatgaggagcacggcaatcacgaagcggccggcccccaccatgaggcagaccatgat
cacgataaagatgcgcaccattcagaggaggaacccggggaagaccaccacgcccatggc
gctctcgatcctcatgtctggctgtcaccgcccctggtgaaaatccaggcccactcgatc
atgaccgccctgcagacgatcgatccggcccacggaagtatttacgcggagaactaccga
cacttcgcatcgaccatcgatgaactggatacgcaattgaagcaaaccttcgccggcagg
caaggccttcaattcatggtctttcatccggcctggggctactttgcccatgcctacgga
ctccagcaggtgcccatcgagatcgagggcaaggaccccaagcccgcccaattgcagcgc
ttgatcgaacatgcccgagaaagcaaaatcaatgtcattttcgttcagccgcaattttcc
accaaaagcgccgggcaaatcgcggaggccatccatggccaggtgctgcccgccgatccg
ctggccgaggactggacgggcaacctgcgcatggtggccgagaagttcaaggcggcattg
cgatag
DBGET
integrated database retrieval system
