Desulfosarcina ovata subsp. sediminis: DSCO28_42380
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Entry
DSCO28_42380 CDS
T06286
Name
(GenBank) hypothetical protein
KO
K03718
Lrp/AsnC family transcriptional regulator, regulator for asnA, asnC and gidA
Organism
dov
Desulfosarcina ovata subsp. sediminis
Brite
KEGG Orthology (KO) [BR:
dov00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
dov03000
]
DSCO28_42380
Transcription factors [BR:
dov03000
]
Prokaryotic type
Helix-turn-helix
Lrp/AsnC family
DSCO28_42380
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HTH_AsnC-type
HTH_24
AsnC_trans_reg
HTH_23
HTH_20
HTH_28
HTH_36
Sigma70_r4_2
HTH_11
NirdL-like_HTH
HTH_29
HTH_Tnp_ISL3
HTH_DeoR
HTH_30
Sigma70_r4
Fe_dep_repress
HTH_IclR
GntR
HTH_22
AsnC_trans_reg_3
PaaX
GerE
TrmB
HTH_Tnp_1
CENP-B_N
HTH_Crp_2
HTH_Cmi2_C
DUF7343
HxlR
DUF7342
HTH_5
CggR_N
Myb_DNA-bind_8
DUF2250
HTH_10
FaeA
HTH_50
HTH_Mga
HTH_40
Rrf2
Phage_terminase
Trp_repressor
Glyco_hydro_77
Motif
Other DBs
NCBI-ProteinID:
BBO83672
UniProt:
A0A5K7ZTY9
LinkDB
All DBs
Position
4821777..4822241
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AA seq
154 aa
AA seq
DB search
MKPERAPMKIDDLNISIIRHLQEGRKSYKVIAEDLGVSENTVRSRVSKLEEEGVLEIVGL
VDPEAIPRHRMVMVGVKLSTMDLVKKGEAFSRVRGVVSVSVVTGRFDLILLVMLKEGFGL
LEFYTEEVSRLDGVQSVETFVVYKSYNLKVPYIY
NT seq
465 nt
NT seq
+upstream
nt +downstream
nt
atgaaaccggaaagggctccgatgaaaatagacgacctgaatatttccatcatccgccat
ttgcaggaaggccgaaagtcctataaagtgattgctgaagatctcggcgtttccgaaaac
acggtccgctcacgggtcagcaagcttgaagaagagggcgtgctggagattgtcgggctt
gtggatccggaagccatcccccggcaccgcatggtgatggtgggcgtcaaactgagtacc
atggacctggtgaaaaaaggtgaggcgttcagccgggtccgcggtgtggtgtccgtcagc
gtggtgaccggccgttttgatctgattctcctggtgatgctcaaagaagggtttggcctg
ctcgaattctacaccgaagaagtctcccgcctcgatggcgtccagtctgtggagacgttt
gtggtttataagagttacaatctgaaagttccgtacatctattag
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