Desulfosarcina ovata subsp. sediminis: DSCO28_42760
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Entry
DSCO28_42760 CDS
T06286
Name
(GenBank) TonB-dependent receptor
KO
K02014
iron complex outermembrane recepter protein
Organism
dov
Desulfosarcina ovata subsp. sediminis
Brite
KEGG Orthology (KO) [BR:
dov00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
dov02000
]
DSCO28_42760
Transporters [BR:
dov02000
]
Other transporters
Pores ion channels [TC:
1
]
DSCO28_42760
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TonB_dep_Rec_b-barrel
Plug
OMP_b-brl_3
OMP_b-brl
Motif
Other DBs
NCBI-ProteinID:
BBO83710
UniProt:
A0A5K7ZU36
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All DBs
Position
4866850..4868955
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AA seq
701 aa
AA seq
DB search
MKNRKKKFRVGLIFLSLLLVGGPLFSLSAMADESKGYQEYSLGEIVVSGKGSSVRDIAIS
DEVTPEDFEAVNADSVADALTYVPGVRVTYGRKMLPEINIHGFDKQRILTLIDGVPYYET
KYGSLDLNQVGLEGVARIDVVKGAPSVLYGPNALGGVVNIITKNASSEKPVLSATAEYGV
DGIDDAYRVGLSHGMKKGNINYWLSYSHKEWDSWDLSDDFDSREGTIMVRQADGSRTRTP
AVIQDEGERVNSDYETDNFWAKIGVEPSEDTEIYVNFHYIKTEKGDPPDIDFVQVRYDYN
YAHFDRISAYDDWGVDLSAEHAFTDAFSLQAKLYYHDHSDEYESYTDETYTQAWALSTYN
DSILGGILLGDYQITDWDTLRFSLHYKEDFHEQRDLEEIPYAESEAATGSVGFENEMTLF
DDKLSIIAGISYDWYEVTKAEDNPNDDNNIIKADTPDTMDEFNPMIGATYQIVDSIQLFA
SVAKKTRFPTLDQIYDGDTPNLGLEAETAINYTAGLFWTFEDKLKLQVAPFFHDISDYIT
DDAPDNPESQSKNYAEVQMRGWEVNMEITPYKDLLFKLGYMTNDASNKSHERASDEVVGV
PEYTATISVQYTLPTIGTQLNLTMLYMGESYRELPSLEEPDTEVIKNETYQLCNAKITQP
FMSDRLKVFLAVENLFDEDYEAEEGFPAPGMRTWIGVKFDL
NT seq
2106 nt
NT seq
+upstream
nt +downstream
nt
atgaagaaccgaaagaaaaagttcagagtggggttaatttttttaagtttattattggtg
ggtggtccgctatttagtttatctgccatggcggatgagagcaaaggataccaggaatat
tcgctgggagagatcgtggtcagtggaaaagggtcatcggtccgcgatattgctatcagc
gacgaggtgacccccgaggatttcgaagccgtcaacgccgacagcgtggccgacgccctc
acctatgttccgggcgtgcgggtcacttatggccgcaaaatgcttcccgagatcaacatt
cacgggttcgacaaacagcgcatattaaccctgatcgacggggttccctactacgaaacc
aagtacggaagcctggacctcaaccaggtcggcctggagggggtcgcccgcatcgacgtg
gttaaaggggccccttccgtcctttacggccccaacgctctgggcggagtggtcaatatc
atcactaaaaatgcgtccagtgagaaaccggtcttgtcggccacggccgagtacggtgtg
gacggcatcgacgatgcttacagagtggggctgtcccatggcatgaaaaaaggcaacatc
aactactggctgagttattcacacaaggaatgggactcctgggatctatccgacgatttc
gactctcgtgaagggacgattatggtacggcaggcagacggatcccgcacaaggacgcct
gccgttatccaggacgagggcgaacgggtcaattcggattatgaaaccgacaacttttgg
gccaaaattggtgtcgagccctcggaagacacggaaatatacgtcaacttccattacatc
aaaaccgaaaaaggcgatccgcccgacatagactttgtgcaggtacggtacgattataac
tatgcgcattttgaccgaatcagcgcctacgacgactggggcgtcgacctgagtgccgag
catgcctttacggacgcgttcagtttgcaggcaaagctttactaccatgaccacagcgat
gaatacgaatcttacacggatgaaacttatacccaagcctgggctttgagcacatacaac
gactccatcctagggggcatactgctaggagactaccaaattaccgattgggacaccctg
cgattttctttgcattacaaagaagacttccacgaacaacgcgaccttgaggagatacct
tatgccgaaagcgaggccgcaacaggctccgtcggtttcgaaaacgagatgacactcttc
gacgacaaattgtcgattatagccggcatcagctatgactggtatgaggttaccaaagcc
gaggataacccgaacgacgacaacaacatcatcaaagcggataccccggacaccatggat
gaatttaatcccatgatcggcgccacctatcagattgtcgacagcatccagttgtttgct
tccgttgccaagaaaacccgttttcctactcttgaccaaatctatgatggcgacacaccc
aacttgggtctggaggcggaaaccgccatcaactatacggccggtctcttttggacgttc
gaagataagctgaagctgcaggtagccccgttttttcacgacatttcggattatatcacc
gacgatgcacctgacaatccagaaagccagtcgaaaaattacgctgaagtccagatgcgg
gggtgggaggtcaatatggaaatcacaccttacaaagatctcctttttaaactcggctac
atgaccaacgacgccagcaacaaaagccacgagcgggccagcgacgaggtggtcggtgtt
cccgaatacacagcaacgatcagtgtgcagtacaccctgccgactatcggcacccagctg
aacttgaccatgctctacatgggcgagtcatacagggagttgccgagccttgaagaacct
gacaccgaggttataaaaaacgagacttaccaattgtgcaacgccaaaatcacccaacca
ttcatgtcagatcgcctgaaggtatttttggcggtggaaaaccttttcgacgaggattac
gaagctgaggaaggtttccccgcaccgggcatgcgcacgtggataggcgtgaaatttgat
ctgtaa
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