Desulfosarcina ovata subsp. sediminis: DSCO28_44530
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Entry
DSCO28_44530 CDS
T06286
Symbol
carB
Name
(GenBank) carbamoyl-phosphate synthase (glutamine-hydrolyzing)
KO
K01955
carbamoyl-phosphate synthase large subunit [EC:
6.3.5.5
]
Organism
dov
Desulfosarcina ovata subsp. sediminis
Pathway
dov00220
Arginine biosynthesis
dov00240
Pyrimidine metabolism
dov00250
Alanine, aspartate and glutamate metabolism
dov01100
Metabolic pathways
dov01110
Biosynthesis of secondary metabolites
dov01240
Biosynthesis of cofactors
Brite
KEGG Orthology (KO) [BR:
dov00001
]
09100 Metabolism
09104 Nucleotide metabolism
00240 Pyrimidine metabolism
DSCO28_44530 (carB)
09105 Amino acid metabolism
00250 Alanine, aspartate and glutamate metabolism
DSCO28_44530 (carB)
00220 Arginine biosynthesis
DSCO28_44530 (carB)
Enzymes [BR:
dov01000
]
6. Ligases
6.3 Forming carbon-nitrogen bonds
6.3.5 Carbon-nitrogen ligases with glutamine as amido-N-donor
6.3.5.5 carbamoyl-phosphate synthase (glutamine-hydrolysing)
DSCO28_44530 (carB)
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Gene cluster
GFIT
Motif
Pfam:
CPSase_L_D2
CPSase_L_D3
MGS
ATP-grasp
Dala_Dala_lig_C
ATPgrasp_Ter
ATP-grasp_3
ATP-grasp_4
ATP-grasp_2
ATP-grasp_5
Motif
Other DBs
NCBI-ProteinID:
BBO83887
UniProt:
A0A5K7ZUI4
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All DBs
Position
5083714..5086974
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AA seq
1086 aa
AA seq
DB search
MPKRTDIHKILIIGAGPIIIGQACEFDYSGTQACKALKEEGFEVVLVNSNPATIMTDPET
ADRTYIEPVTPEAVAKIIEKERPDALLPTLGGQTGLNTAVEVARQGVLEQFGVELIGASL
DAIEKAESRDRFREAMHRIGLKIPESGIANSMEEARRIAESIGFPLIIRPSYTLGGTGGG
VAYNPEDLENIAKSGLDASLTHQVMLEQSVLGWKEYELEVMRDHADNVVIICSIENFDAM
GVHTGDSITVAPAQTLTDREYQVMRDASLAIMREIGVDTGGSNVQFAVNPKNGDLIVVEM
NPRVSRSSALASKATGFPIAKIAAKLAVGYTLDEIANDITGETLASFEPTLDYCVVKIPR
WTFEKFPETQDLLTTSMKSVGETMAIGRTFKEALQKGLRSLEIGRSGFGADGKDRLEEDG
VSPTLDEIEQKLAIPNSQRIFYLRHALEAGMAIEEIYQITAIDPWFLFQLNQIFQMEQTL
ARAGATADPCTPGAPFTALSADELRRAKEYGFSDVQLAHLTGSTEKTVEQARKAMGIRPV
YKLVDTCAAEFRAATPYYYSTYETECEARVSERKKVMILGGGPNRIGQGIEFDYCCVHAS
FALREEGVESIMVNSNPETVSTDYDTSDKLYFEPLTREDVLHIVEKEKPHGVIVQFGGQT
PLNLSTPLFQEGVPILGTQPESIDRAEDRELFQAMLQKLDLKQPANGTALSIEEALAIAD
TIGYPVIVRPSFVLGGRAMKIVYDPKDMENFTRLAILASPGHPVLIDKFLEAAIEVDVDA
ISDGTVTIIGGIMQHIEAAGVHSGDSACVLPPYSIEGAMIEQISRATKAMAAELKVVGLM
NVQYAIKDDQLYVIEVNPRASRTVPFVSKATGVPLAKLATKIMLGKTLAELGLTEEVVPG
HLSVKEAVLPFDRFPDVDTLLGPEMKSTGEVMGIGTDFGLAYAKAQLGAGQRLPLEGTVF
ISVGDEDKPAALPVARQFADMGFAILATDGTWSHLSSSGIPAERINKVSQGQPHVADAIK
NGRIQLIINTGTGNDSRKDGYTIRRAALKFKVPYATTTAGAMAMCHGVAALREKPFSVKP
VQDYHA
NT seq
3261 nt
NT seq
+upstream
nt +downstream
nt
atgcccaaacgcacggacatccataaaatcctgatcatcggcgcaggccccatcatcatc
ggacaggcctgcgagtttgactattccgggacccaggcgtgcaaggccctcaaagaagag
ggctttgaagtcgtcctggtcaattccaacccggccaccatcatgaccgacccggaaacc
gccgaccgcacctacatcgaaccggtgacccccgaggcggtggccaaaatcattgaaaaa
gagcgtcccgacgccctgttgcccaccctgggcgggcagaccggactgaatacggccgtc
gaggtagcgcggcagggcgtgctggaacagttcggcgtcgagttgatcggggcctccctg
gatgccatcgaaaaggccgaatcccgggatcgtttccgggaggccatgcatcgcatcggc
ctgaaaattcccgaaagcggcatcgccaactccatggaagaggcccgccgcattgccgaa
tccatcggatttccgctgatcatccggcccagttacaccctggggggcaccggcggtggc
gtggcctacaacccggaggatttggagaatatcgccaaatcggggctggacgccagcctc
acccaccaagtcatgctggaacagtcggtgctgggctggaaagagtacgagctggaggtg
atgcgcgaccacgccgacaacgtggtgatcatttgttccatcgaaaacttcgatgccatg
ggcgtgcataccggtgactccatcaccgtggcgccggcccagaccctgaccgaccgggag
tatcaggtaatgcgtgacgcatctctggcgatcatgcgcgagatcggtgtggataccggc
ggctccaatgtgcagtttgccgtcaacccgaaaaacggtgacctgatcgtcgtggagatg
aacccgcgggtttcccgcagcagcgccctggcctccaaggccaccggttttcccatcgcc
aaaatcgccgccaaactggccgtgggctacaccctggacgaaatcgccaacgatatcacc
ggcgaaaccctggcctccttcgaacccaccctggactactgcgtggtcaagattccgcgc
tggacctttgaaaaatttcccgaaacccaggatttgctcaccacgtcgatgaaatcggtg
ggcgaaaccatggccatcggccgcactttcaaggaggctctgcagaaggggctgcgctcg
ctggagatcggccgctccggtttcggtgccgacggcaaggaccgcctggaggaggacggg
gtctcgccgaccctggacgagatcgagcagaaactggccatccccaattcccagcgtatc
ttctacctgcgccatgccctcgaagcgggcatggccatcgaagagatctatcagattacc
gccatcgatccctggttcctttttcagctgaaccagatttttcagatggagcagaccctg
gcccgggccggcgccacggcggacccgtgcacaccgggcgcccccttcacagcgctctcc
gccgacgagttgcgacgggccaaggaatatggcttttccgatgtccagctggcccatctg
accggcagcacagaaaagacggtcgaacaggcgcgcaaggccatgggcatccggccggtc
tacaaactggtggatacctgtgcggccgagttccgcgcggccacgccctactactattcc
acctacgagaccgagtgcgaggcgcgggtctccgagcgcaagaaggtgatgatcctgggg
ggcggacccaaccgcatcggccagggcatcgagttcgactattgttgcgtgcacgcctcc
ttcgctctcagggaagagggggtagagagcatcatggtcaacagcaacccggaaacggtg
agcaccgactatgatacctcggacaagctctatttcgagccgctgacccgcgaggacgtg
ctgcacatcgtcgaaaaagagaagccccacggcgtcatcgttcagttcggcggacagacg
cccctgaacctctccacccccctgttccaggaaggcgtccccatcctgggcacccagccg
gaaagcatcgaccgggccgaggaccgggaactgttccaggccatgctccagaaactcgat
ctcaagcagccggccaacggcacggcgctctccattgaggaagcactggccattgccgac
accatcggctatccggtgatcgtgcgtccctccttcgtgctcgggggccgtgcgatgaag
atcgtttacgaccccaaggatatggagaattttacgcggctggccattctggcctccccg
ggacacccggtgctcatcgataaatttctggaagcggccatcgaggtggatgtggatgcc
atcagcgacgggaccgtgaccatcatcggcggcatcatgcagcacatcgaggcggccggc
gtgcacagcggcgactcggcctgcgtcctgcccccgtacagcatcgagggtgcgatgatc
gagcagatcagtcgtgccaccaaggccatggcagcggaactgaaggtcgtgggcctgatg
aacgtccagtacgccatcaaggacgaccagctttacgtgatcgaagtcaatccacgcgcc
tcgcggacggtgccctttgtgagcaaggccaccggcgtgcccctggccaaactggccacc
aagatcatgctgggcaagaccctggccgaactcgggctgaccgaagaggtcgttcccggg
cacctgtccgtcaaggaggcggtcttgcccttcgaccggttcccggatgtggacaccctt
ttgggaccggaaatgaaatccaccggtgaggtgatgggcatcggcaccgacttcggcctg
gcctatgccaaggcccagctgggggccggccagcgcctgccgctggaggggacggtcttc
atcagcgtgggcgatgaggacaagccggccgcactgcccgtggcccggcagttcgccgac
atgggttttgccatcctggccaccgacggcacctggtcacacctttcgtccagcggcatc
ccggccgaacggatcaataaggtctcccaggggcagccccatgtcgccgatgccatcaag
aacggccggatccagctgatcatcaacaccggcaccggcaacgactcgcgcaaggacggg
tacacgatccgccgggcggcactcaaattcaaggtgccctatgccaccaccacggccggc
gccatggccatgtgccacggcgtagcggcactgcgggaaaaacccttttcggtcaaaccg
gttcaggattaccatgcgtaa
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