Desulfosarcina ovata subsp. sediminis: DSCO28_46840
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Entry
DSCO28_46840 CDS
T06286
Symbol
pdxS
Name
(GenBank) pyridoxal 5'-phosphate synthase subunit PdxS
KO
K06215
pyridoxal 5'-phosphate synthase pdxS subunit [EC:
4.3.3.6
]
Organism
dov
Desulfosarcina ovata subsp. sediminis
Pathway
dov00750
Vitamin B6 metabolism
dov01100
Metabolic pathways
dov01240
Biosynthesis of cofactors
Module
dov_M00916
Pyridoxal phosphate biosynthesis, R5P + glyceraldehyde-3P + glutamine => pyridoxal-P
Brite
KEGG Orthology (KO) [BR:
dov00001
]
09100 Metabolism
09108 Metabolism of cofactors and vitamins
00750 Vitamin B6 metabolism
DSCO28_46840 (pdxS)
Enzymes [BR:
dov01000
]
4. Lyases
4.3 Carbon-nitrogen lyases
4.3.3 Amine-lyases
4.3.3.6 pyridoxal 5'-phosphate synthase (glutamine hydrolysing)
DSCO28_46840 (pdxS)
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Motif
Pfam:
SOR_SNZ
ThiG
NMO
TetR_C_27
NanE
Motif
Other DBs
NCBI-ProteinID:
BBO84118
UniProt:
A0A5K7ZV93
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Position
5333464..5334348
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AA seq
294 aa
AA seq
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METIGKTREPVNRGFAEMFKNGVIMDVTTPEEAKIAETAGACAVMALERVPADLRKQGGV
ARMSAPEMIERIMQAVSIPVMAKVRIGHFMEARILEVLGVDFIDESEVLTPADEELHVDK
RQFRVPFVCGARNLGEALRRIDEGASMIRTKGEAGTGNVVEAVRHMRAINREIEALQSMD
RTEMEAQAKTYRVPVDLVEETRERGRLPLVNFAAGGLATPADAALMMQLGTDGVFVGSGI
FKSQHPERTARAIVQAVIHYERPDKLLEISKDLGDPMPGQEIAALETRLAERGW
NT seq
885 nt
NT seq
+upstream
nt +downstream
nt
atggaaaccatcggaaaaacccgtgagccggtcaaccgcggctttgcggaaatgtttaaa
aacggcgtcatcatggacgtcactaccccggaagaggccaaaatcgccgagaccgccggt
gcctgtgcggtcatggcgctggaacgggtaccggccgatctgcgcaagcaggggggggtg
gcccgcatgagcgcaccggagatgatcgagaggatcatgcaggcggtctccattccggtg
atggccaaggtgcgtatcggccacttcatggaggcgcgcatattggaagttctgggcgtg
gacttcatcgacgaaagcgaagtgctcaccccggccgacgaagagttgcatgtggacaag
cgccagttccgcgtgccctttgtctgcggggcgcgcaatctgggcgaggccttgcgccgc
atcgacgagggggcgtccatgatccgcaccaagggcgaagccggaacgggcaacgtggtg
gaggcggtacggcacatgcgcgccatcaaccgggagatcgaagcacttcaatccatggat
cgtacggaaatggaggcacaggccaagacgtatcgggtccccgttgacctcgtggaggaa
acccgcgagcggggacgcctgccgctggtcaattttgccgccggcggcctggccaccccg
gccgatgcggccctgatgatgcaactgggcactgacggcgtatttgtcggctcgggaatt
ttcaaatcccagcaccccgagcgcacggcccgggcgattgtccaggcggtcattcactac
gaacggccggacaaactgcttgaaatttccaaggacctgggcgatcccatgccgggtcag
gagatcgccgccctggaaacccgcctggcggaacgggggtggtag
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