Desulfosarcina ovata subsp. sediminis: DSCO28_46920
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Entry
DSCO28_46920 CDS
T06286
Symbol
lysA-1
Name
(GenBank) diaminopimelate decarboxylase
KO
K01586
diaminopimelate decarboxylase [EC:
4.1.1.20
]
Organism
dov
Desulfosarcina ovata subsp. sediminis
Pathway
dov00300
Lysine biosynthesis
dov00470
D-Amino acid metabolism
dov01100
Metabolic pathways
dov01110
Biosynthesis of secondary metabolites
dov01120
Microbial metabolism in diverse environments
dov01230
Biosynthesis of amino acids
Module
dov_M00527
Lysine biosynthesis, DAP aminotransferase pathway, aspartate => lysine
Brite
KEGG Orthology (KO) [BR:
dov00001
]
09100 Metabolism
09105 Amino acid metabolism
00300 Lysine biosynthesis
DSCO28_46920 (lysA-1)
09106 Metabolism of other amino acids
00470 D-Amino acid metabolism
DSCO28_46920 (lysA-1)
Enzymes [BR:
dov01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.1 Carboxy-lyases
4.1.1.20 diaminopimelate decarboxylase
DSCO28_46920 (lysA-1)
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Motif
Pfam:
Orn_Arg_deC_N
Orn_DAP_Arg_deC
Motif
Other DBs
NCBI-ProteinID:
BBO84126
UniProt:
A0A5K7ZVE8
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Position
complement(5338149..5339390)
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AA seq
413 aa
AA seq
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MDYFEYRDGQLWAEEVRVAELVERFGTPLYIYSAKTLTRHFLAFDAALKGLDHLTCFSVK
ANSNVNLLRHLGTLGAGVDIVSGGELYRAVRAGIAPAKIVFSGVGKQAHEIREALSAGIL
MFNVESSQELECIGRIAQEMQTVARISIRINPDVDPKTHPYISTGLKENKFGLDMLEATG
AYLMARKHPFLDPVGMDCHIGSQLTQIGPIVEALEKLLVFADRLHASGIAIRYLDLGGGL
GITYNDELPPLPADLGRAISTTLAGRKLTVILEPGRAIAGNAGIMVTRVLYTKKTPVKHF
VIVDAAMNDLVRPSLYGAYHRICEVTPTDRGLMTVDVVGPICESGDFLAQNRLLPALAPG
DTLAVFSAGAYGFSMASQYNSRPRSAEVLVDGENSLLVRRRETYEDLIALEVE
NT seq
1242 nt
NT seq
+upstream
nt +downstream
nt
atggattatttcgaataccgcgacggccagctctgggccgaggaagtacgggtggcggaa
ttggtcgagcgattcggcacaccgctgtacatttattccgcaaaaaccctgacccgccat
ttcctggccttcgatgccgcactgaaaggccttgatcatctgacctgcttttccgtcaag
gccaacagcaatgtcaatctgctgcgtcacctgggcacgctcggcgccggtgtcgacatt
gtttccggtggagagttgtaccgggcggtgcgggccggtatcgcccccgccaaaattgtc
ttctccggcgtgggtaaacaggcccacgaaatccgcgaggccctgtcggccggcattctc
atgttcaatgtggagtcgtcccaggaactggaatgtatcgggcgcatcgcccaggagatg
cagacagtggcccgcatcagcatccgtatcaatccggacgtggatcccaaaacgcatccc
tacatttccaccggcctcaaggaaaacaagttcggcctcgatatgctcgaggccacgggt
gcctacctcatggccagaaagcacccctttctggatccggtgggcatggattgccacatc
ggctcccaactgacccagatcggccctattgtggaggcactggaaaaactgctcgtcttt
gccgatcggctgcacgcatcgggcatcgccatccgctatcttgacctgggcggcggcctg
ggcatcacctacaatgacgaactgccccccctgccggccgacctgggccgggcgatttcc
acaaccctggccgggcgcaagctgaccgtcatcctcgagccgggccgggccattgccggc
aacgccgggatcatggttacccgggtgctctacaccaaaaagacgccggtgaagcatttc
gtgattgtggatgccgccatgaacgacctggtgcgtccctcgctctacggtgcctaccac
cgcatctgcgaagtcacccccacagaccggggcctcatgacggtcgatgtggtcggcccc
atctgcgagagcggcgattttctggcccagaatcgcctgttgccggcccttgcgcccggg
gacacgctggccgttttctctgccggtgcctacgggttcagcatggcatcccaatataac
tcccgcccccggtccgccgaggtgctggtggacggtgaaaacagtcttctggtgcgccgg
agggagacatacgaggatctgattgccttggaagtagaatga
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