Desulfosarcina ovata subsp. sediminis: DSCO28_48550
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Entry
DSCO28_48550 CDS
T06286
Symbol
polA
Name
(GenBank) DNA polymerase
KO
K02335
DNA polymerase I [EC:
2.7.7.7
]
Organism
dov
Desulfosarcina ovata subsp. sediminis
Pathway
dov03030
DNA replication
dov03410
Base excision repair
dov03420
Nucleotide excision repair
dov03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
dov00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
DSCO28_48550 (polA)
03410 Base excision repair
DSCO28_48550 (polA)
03420 Nucleotide excision repair
DSCO28_48550 (polA)
03440 Homologous recombination
DSCO28_48550 (polA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
dov03032
]
DSCO28_48550 (polA)
03400 DNA repair and recombination proteins [BR:
dov03400
]
DSCO28_48550 (polA)
Enzymes [BR:
dov01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
DSCO28_48550 (polA)
DNA replication proteins [BR:
dov03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
Other elongation factors
DSCO28_48550 (polA)
DNA repair and recombination proteins [BR:
dov03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA polymerase I
DSCO28_48550 (polA)
NER (nucleotide excision repair)
GGR (global genome repair) factors
DSCO28_48550 (polA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol_A
5_3_exonuc_N
5_3_exonuc
DNA_pol_A_exo1
DNA_polI_exo1
HHH_5
Motif
Other DBs
NCBI-ProteinID:
BBO84289
UniProt:
A0A5K7ZVM0
LinkDB
All DBs
Position
complement(5520017..5522686)
Genome browser
AA seq
889 aa
AA seq
DB search
MPTLYLIDGSAYIYRAYHAVRGLSNSNGLPTNATFGFTRMLIKLMADRNPSHVAMFFDAK
GPTFRHERFADYKANRPPMPEDLVQQLPWIRKVTEAFNIPVFEMSGYEADDLIGTLARHG
EANGFRVIMVTGDKDFMQLVTPHCTIWDPMKDKVIDTAAIDQAFELEPRQMIDVMGFSGD
TADNIPGVPGIGQKTAVKLIHTFGSMEGVYDGIDTIRAKKQKQNLIQFKDQALLSRELVT
IDQNAPIEFDPQRLKAQDADDDALTRLFAELEFRQLQQEYAHQDQSIQRHYAAIMDSATL
DGLIQRLKTSGRFALDTETTALDPMRARLVGLSFAVKPGEAWYVPVGHNYLGAPAQLPLQ
TVLDRLQPVLADPAIEKIGQNIKYDWAVLRRHGVDLAGVTFDTMVASYLLEPAKRVHGLD
QIALDYLGHKNIRYEEVAGKGKNAVTFDQVTIDKAIPYACEDADITLSAHEIFLPRLEAD
GLSDLMKNVEMPLLPVLLEMEMTGICVDREKLHDLSKSFAGQLELLEREIYLQAGETFNI
NSSQQLGHILFEKLKLPVQKKTKKKTGYSTDVEVLTTLARSHELPALVLRHRSLAKLKST
YADALLDLIHPQTGRIHTSFNQTVAATGRLSSSDPNLQNIPIRTAEGREIRKAFVPREGW
RLLSADYSQIELRILAHCSGDPILIQSFKEDEDIHTRTATEVFEIFPQMVTDELRRQAKA
INFGIIYGMSAFGLARELEISNKMAQTYIDHYFSRYQGVKAFIDQTIQKAHETRRTSTLL
GRIRQLPDIASSNRNVRQFAERTAINTPIQGTAADLIKLAMIRVDRALRKDRMQTAMLLS
VHDEMIFEVPPGELEAAKTLVREAMENVWELAVPLKVNIAEGRNWAEAH
NT seq
2670 nt
NT seq
+upstream
nt +downstream
nt
atgccgactctctacctgatcgacggcagcgcctatatttaccgcgcttaccatgcggtt
cgggggctgtccaacagcaacgggctgcccaccaacgcaacattcggctttacccgtatg
ctgatcaagctgatggccgatcgcaaccccagccatgtggccatgtttttcgatgccaaa
ggtccgaccttccgtcacgaacgttttgccgattacaaggccaaccggccgcccatgccc
gaggatctggttcagcaattgccctggatccgcaaagtgaccgaagcgttcaacattccg
gtgtttgagatgagcggttacgaagccgacgacctcatcggtacactggcccgccatggg
gaagccaacggtttccgtgtgatcatggtcaccggagacaaggacttcatgcagctggtg
acgccccactgcaccatctgggaccccatgaaagacaaggtcatcgataccgcggccatc
gaccaagccttcgaactggagccccggcagatgatcgatgtcatgggattttccggtgat
acggcggataacatcccgggcgtcccgggaatcggtcagaaaacagcggtcaaattgatc
cataccttcggcagcatggagggggtctatgacggcatcgacacgattcgtgcgaaaaaa
cagaagcagaacctgattcagttcaaggatcaggccctgctcagccgtgaactggtcacc
atcgatcagaatgcccccattgaattcgatccgcagcgattgaaagcccaggatgccgat
gacgatgccctgacccggctgtttgccgaactggagttccggcaactccaacaggaatat
gcccaccaggaccaatccatccagcggcactatgcggccatcatggacagcgctacgctg
gacggtctgatccagcgcctgaaaacctccgggcggtttgccctggataccgaaaccacc
gccttggaccccatgcgggcccgtctcgtcggcctctccttcgccgtcaagcccggtgag
gcgtggtacgtccctgtggggcacaactacctgggagcccccgcacagctccccttgcaa
acggtcctggaccgcctgcagccggttctggccgatcccgccattgaaaaaatcggccag
aacatcaagtatgactgggcggtgctgcgacgccacggcgtggatctggccggcgtgacc
ttcgacaccatggtggcctcatacctgctcgagccggccaaacgcgtccacggattggat
cagatcgccctggactatctgggccacaaaaatatccgctacgaggaagtcgccggaaaa
ggcaaaaacgcggtcaccttcgaccaggtgacgatcgacaaagcgatcccctacgcctgc
gaggatgccgacatcactctctcggcccatgagatattccttccgcgactggaggcggac
ggattgagcgacctgatgaaaaatgtggagatgcccctgctgccggttcttctggagatg
gaaatgaccggtatctgcgtggaccgggagaagcttcacgacctttccaaatcctttgcc
ggccagcttgaattgttggaacgcgaaatttatctgcaggccggcgagacattcaatatc
aactcctcccagcaactgggccatattctcttcgaaaagctcaaactgccggtccagaag
aaaaccaagaaaaaaaccggctactccaccgacgtggaggtcctcaccaccctggcgcgc
agccatgaactgccggccctggtgctgcgccaccgcagcctggccaagctgaaatcaacc
tatgccgacgcccttctggatctgattcatccgcagaccggccggatccacacctctttc
aaccagaccgtggccgccaccgggcggctgagcagcagcgatcccaatctgcagaacatc
cccatccgcaccgcagagggccgcgaaattcgcaaggcgttcgtgccccgtgaaggctgg
cggctgctctcggcggactactcccagatcgaactgcgcatcctggcccactgttccggc
gatccgatcctgattcagtccttcaaggaagacgaggacatccatacgcgaacggccacc
gaagtgttcgagatctttcctcagatggtcaccgacgagctgcgccgccaggccaaggcg
atcaacttcgggatcatttacgggatgagcgccttcggtctggcccgggagctggaaatc
agcaacaaaatggcccagacctatatcgatcactatttttcccgctaccagggcgtcaag
gcattcatcgatcagaccattcaaaaggctcacgaaacccgccggaccagcacgcttttg
ggccgaatccggcaactgcccgacatcgccagcagcaatcgcaatgtgcgccagtttgcc
gaacgcactgccatcaacacccccatccagggaacggccgccgatttgatcaaactggcc
atgatccgtgtggaccgggccctgcggaaagaccgcatgcaaaccgccatgctgctctcc
gtccatgacgaaatgatcttcgaggtaccgcccggggaactcgaagcggccaaaaccttg
gtacgcgaagcgatggaaaacgtctgggaactggccgtgcccctgaaggtcaacatcgcc
gagggacggaactgggccgaagcccactga
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