Desulfosarcina ovata subsp. sediminis: DSCO28_48750
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Entry
DSCO28_48750 CDS
T06286
Name
(GenBank) hypothetical protein
KO
K02666
type IV pilus assembly protein PilQ
Organism
dov
Desulfosarcina ovata subsp. sediminis
Brite
KEGG Orthology (KO) [BR:
dov00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02044 Secretion system [BR:
dov02044
]
DSCO28_48750
02035 Bacterial motility proteins [BR:
dov02035
]
DSCO28_48750
Secretion system [BR:
dov02044
]
Type II secretion system
Pilin secretion/fimbrial assembly protein
DSCO28_48750
Bacterial motility proteins [BR:
dov02035
]
Pilus system
Pilus assembly proteins
DSCO28_48750
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Secretin
AMIN
type_II_gspD_N0
Secretin_N
STN
Motif
Other DBs
NCBI-ProteinID:
BBO84309
UniProt:
A0A5K7ZVN9
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Position
5544931..5547291
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AA seq
786 aa
AA seq
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MRNLGIKFSERLTLTFCMALVVAVLSAGCAARQSGMEKAASSPLAEITSIELSQDVNFAN
VVIRGTEPLTYMAVKQREPIGVVILIPGSRLTLTSPDLQSPGPPVKAIHASQAEAKIDTS
RIEILLATDSSYNVVKDGNALKIQFSKTPLDVSSAATVLPAPSVQSNPSPATPQTVASTG
VYQGTGMPVGSENQIWVNRIDFLGEPNGRSTLSIETTAPVDYKINKVSNRLLELRLMGTN
IAEFRQRPLITTRFESAVNRIVPVQLSSMRGYSLFSIELREPVGYHTEQVGGLLLVHFDA
SSVPPAPVDEANLPAWKKALTETLGMSGMDMTGSGAQASGTPRLASQPNPDTVGEPAMPD
VVLDSDQAVVVTKKIKTYKGEKIALDFYQTDIKNVFRILREVSGKNFAIDKDVSGKVTMT
LDKPVPWDQVMDLVLRMNQLGMIVEGDIIRIATLSTLKKENDLRKAQIASLQEEKKQIKA
LEPLETRYIPISYSDAGKEVLPHIQNIISKDRGSVTVDTKNNQLIVTDTADKIAQAIEIA
RQIDKVTSQVIIEARIVEISETFSREVGFEWGLSVGPVSMNEGGTTYETNVAMNYPASTS
NGIGLTYNKIAGTPFTLDAALTALETNGKGKILSSPKIVTLNNKKAKIKQGQEYGYLERD
SSGGSSVSFKDVDLLLEVTPHVTPDNRISLSILITKNDVVDFVDDVPVISTNEAETELLV
NDGDTIVIGGIIKKTRSNTKNAFPGLHKVPVLGWLFQSNLEENDNSELLIFMNPKIVQLE
QRNMVN
NT seq
2361 nt
NT seq
+upstream
nt +downstream
nt
atgcgcaacttagggatcaaattttcagaaagattgacactcactttttgcatggccttg
gttgtcgctgttttatccgctgggtgtgcagcccggcaatcgggcatggaaaaggcagca
tcgagcccattggcagagattacctccattgaattgtcccaggatgtaaatttcgccaat
gtcgtaatccgtgggaccgaaccgttgacctatatggcggtaaagcagagggagcccatt
ggggttgtgattcttattcccggtagccggttgactctgaccagcccggatctccaatcc
ccaggaccacccgtcaaggctattcatgcgagccaggctgaggccaaaatcgatacttcg
cggatcgaaattcttttggctaccgacagctcctacaacgttgttaaagatggcaacgcg
cttaaaatacaattttcaaagactccgttggacgtgagttctgccgcaacggttctccca
gcgccatccgttcaatcgaacccatccccagccacgcctcagaccgttgcatcaacgggt
gtttaccagggaacggggatgccggtgggcagcgaaaatcagatctgggtgaatcgaatc
gactttttaggggagccaaacggtcgttcgaccttatccattgagactacggcacccgtg
gattataaaatcaacaaggtctccaaccggcttttggaactgcgtctgatgggtaccaat
atcgccgaattccggcagcgtccgctgattacgacgcgtttcgaaagtgccgtcaatcga
atcgtgccggtccaactgtcatcaatgagggggtattctcttttttccatcgaactgcgc
gaacccgttgggtatcataccgagcaggtcggtggactccttttggttcattttgatgca
tcctctgttccgccggcacctgtcgatgaagccaatttgcctgcctggaaaaaggccctt
acggagactctcggcatgagtggaatggatatgacagggtctggggcacaagcctcggga
accccccgcctggcatcacagccgaatccggataccgtgggtgagccagccatgccggac
gttgttctcgactcggatcaggctgttgtcgtaacaaaaaaaattaaaacctataagggt
gaaaagattgctctggatttctaccagaccgacataaaaaatgtatttaggattctccgc
gaagtgagcggcaagaactttgccattgataaagatgtcagcggcaaagtgaccatgacc
ctcgataaaccggttccctgggaccaggtcatggatctggtgctgcgaatgaatcagctc
gggatgattgtcgagggcgatattatccgcatcgccacgctatccaccctgaaaaaagaa
aacgacctgcgcaaggcgcaaattgcctccctgcaagaagagaaaaagcagatcaaggcg
ttggaacctcttgaaacccgctacatcccgatcagttattccgatgccgggaaagaggtc
ttgcctcacattcagaacattatttccaaagatcgcgggtctgtcaccgtggataccaag
aacaaccagctcatcgttaccgacactgccgacaaaattgcccaggcgattgaaattgca
aggcagatcgacaaggtcacttctcaggtgatcattgaggcaagaattgttgaaatcagt
gaaacgttttctagagaagtgggatttgaatgggggctgagcgttgggccggtcagtatg
aatgaaggcggcacaacttacgaaaccaacgtagccatgaactatccggccagtacttcc
aatggaattggtttgacctataacaaaatcgcgggtacgcctttcacattagacgccgcg
cttaccgctttggaaacgaacgggaagggcaaaattctctcttctcccaaaatcgttacc
ctgaacaacaagaaggcgaagatcaaacaagggcaagaatatggctatcttgaaagggat
tcctctggtggatcgtcggtttctttcaaggatgtggacttgctgttggaggtaactccg
cacgtcactccagacaacaggatctcgctaagcattttgattaccaagaatgatgtggtc
gattttgtagacgatgtaccggtcatatctacgaacgaagccgaaacggaactgctggtt
aatgatggggataccattgttatcggtggaattatcaaaaagactcggtcaaataccaaa
aatgcatttccaggattacacaaagtcccggttctcggttggctatttcaaagtaatctt
gaagagaacgacaatagcgaattgctgatttttatgaatccgaagatcgttcagttggag
caacgaaacatggtcaattga
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