Desulfosarcina ovata subsp. sediminis: DSCO28_49640
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Entry
DSCO28_49640 CDS
T06286
Symbol
trpB-2
Name
(GenBank) tryptophan synthase beta chain
KO
K06001
tryptophan synthase beta chain [EC:
4.2.1.20
]
Organism
dov
Desulfosarcina ovata subsp. sediminis
Pathway
dov00260
Glycine, serine and threonine metabolism
dov00400
Phenylalanine, tyrosine and tryptophan biosynthesis
dov01100
Metabolic pathways
dov01110
Biosynthesis of secondary metabolites
dov01230
Biosynthesis of amino acids
Module
dov_M00023
Tryptophan biosynthesis, chorismate => tryptophan
Brite
KEGG Orthology (KO) [BR:
dov00001
]
09100 Metabolism
09105 Amino acid metabolism
00260 Glycine, serine and threonine metabolism
DSCO28_49640 (trpB-2)
00400 Phenylalanine, tyrosine and tryptophan biosynthesis
DSCO28_49640 (trpB-2)
Enzymes [BR:
dov01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.1 Hydro-lyases
4.2.1.20 tryptophan synthase
DSCO28_49640 (trpB-2)
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Motif
Pfam:
PALP
Motif
Other DBs
NCBI-ProteinID:
BBO84398
UniProt:
A0A5K7ZW09
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Position
complement(5641754..5643130)
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AA seq
458 aa
AA seq
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MQPKSIVLTKNDIPRKWYNILADIKMNPPLGPDGNPISPDMLAPVFPMNLIEQEVSTERW
IDIPEPVLDVLSIWRPAPLTRASAFEKALGTPAKIYFKNEGMSPPGSHKPNTAVPQAYYN
KVFGIENITTETGAGQWGSALSFACAQYGLTCKVFMVRISFDQKPYRKAMMQTWGGECIA
SPSSETKAGRDALEKDPNTPGSLGIAISEAVEAAVGDTSGKTRYSLGSVLNHVMLHQSII
GLEAKKQFEIAGDYPDIVIGCAGGGSNFAGLAFPYVLDKINGRDIEIYPVEPKACPTMTR
APFAYDHGDTAGYTPLLPMYSLGHNFVPAPIHAGGLRYHGMAPTVSQLINEGLLAPKSVG
QMDAYKAGILWARTEGFIPAPETTSAIAQVVVEAEKAKAEGKEKTIVFTFSGHGLLDLGA
YEKYFAGELSDFTLEDAEIEESTEILKDYPKPQEMKSR
NT seq
1377 nt
NT seq
+upstream
nt +downstream
nt
atgcaaccgaaaagcatcgttctgaccaaaaatgacattccgcgcaaatggtacaacatt
ctggccgacatcaaaatgaacccgcccttgggaccggacggaaaccccattagccccgac
atgctggcaccggtctttcccatgaacctgatcgagcaggaggtcagcaccgagcgctgg
atcgacattccggagccggttctggacgtgctttccatctggcgcccggcgccgctgacc
cgggccagcgcctttgagaaggcgctgggaacgccagccaaaatttactttaaaaatgaa
ggcatgagcccgccgggcagccacaagcccaataccgccgtaccccaggcctactacaac
aaggtgttcgggatcgagaacatcaccaccgaaaccggtgccggccagtggggcagcgcc
ctctcttttgcctgcgcccagtacggattgacctgcaaggtattcatggtgcgcatcagc
ttcgaccagaaaccctaccgcaaagccatgatgcagacctggggcggcgagtgcattgcc
tcgccgagcagcgaaaccaaggccggccgcgacgccttggaaaaagatcccaacactccg
ggaagcctggggattgccatttccgaagctgtcgaggcggcggttggcgatacctccggc
aaaacccgctactccctgggcagcgtcctcaaccatgtcatgctgcaccaaagcatcatc
gggctggaagccaaaaaacagttcgaaatcgccggtgactatccggacatcgtcatcggt
tgcgccggtgggggcagtaacttcgccggcctggccttcccctacgtgctggacaagatc
aacggccgcgatatcgagatatacccggtggaacccaaggcctgcccaaccatgacccgg
gcgccgtttgcctatgatcacggggacaccgccggctatactccgctgctgcccatgtac
agcctggggcacaacttcgtacccgcccccatccacgccggcgggctgcgctaccacggc
atggctcccaccgtgagccagttgattaatgaggggctgctcgcacccaaatcggtcggt
cagatggacgcttacaaagccggcatcctgtgggcacgcaccgaaggcttcatcccggca
ccggaaaccaccagtgccatcgctcaggtagtggttgaagccgagaaggccaaggcggaa
ggaaaagaaaagaccatcgtgttcaccttcagtggccatggtctgttggatcttggtgcc
tacgaaaaatactttgccggggaattgtccgattttaccctggaggacgccgaaatcgag
gaatccactgagattctgaaagattaccccaaaccgcaggaaatgaagagccgctga
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