Desulfosarcina ovata subsp. sediminis: DSCO28_49880
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Entry
DSCO28_49880 CDS
T06286
Name
(GenBank) cytidine deaminase
KO
K01493
dCMP deaminase [EC:
3.5.4.12
]
Organism
dov
Desulfosarcina ovata subsp. sediminis
Pathway
dov00240
Pyrimidine metabolism
dov01100
Metabolic pathways
dov01232
Nucleotide metabolism
Brite
KEGG Orthology (KO) [BR:
dov00001
]
09100 Metabolism
09104 Nucleotide metabolism
00240 Pyrimidine metabolism
DSCO28_49880
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02044 Secretion system [BR:
dov02044
]
DSCO28_49880
Enzymes [BR:
dov01000
]
3. Hydrolases
3.5 Acting on carbon-nitrogen bonds, other than peptide bonds
3.5.4 In cyclic amidines
3.5.4.12 dCMP deaminase
DSCO28_49880
Secretion system [BR:
dov02044
]
Type II secretion system
Competence-related DNA transformation transporter (DNA-T) core components
DSCO28_49880
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
dCMP_cyt_deam_1
MafB19-deam
zf-RING_15
APOBEC_N
Motif
Other DBs
NCBI-ProteinID:
BBO84422
UniProt:
A0A5K7ZVZ5
LinkDB
All DBs
Position
complement(5665847..5666356)
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AA seq
169 aa
AA seq
DB search
MTETSTGKRTGYLSWDDYFMAVALLSAQRSKDPNTQVGACIVNAQKHIVGVGYNGFPTGC
SDDTLPWCREGAFLDTKYPYVCHAELNAVLNSGPGNLTGCSIYTALFPCNECAKVIIQVG
IREVVFLSDKYAGTDSVRASRRMFDQAGVVCRQLIPASPTISIRLTENG
NT seq
510 nt
NT seq
+upstream
nt +downstream
nt
atgaccgaaaccagcaccggcaaacgaaccggctatctctcgtgggatgactatttcatg
gctgtggcgctcctgtccgcccagcgcagcaaagaccccaacacccaggtgggtgcctgt
atcgtcaatgcccaaaagcacatcgtcggcgtcggatacaacgggttccccaccggttgc
tccgacgacaccctgccctggtgtcgggaaggcgcgtttctggacaccaaatacccatat
gtctgccacgcggaactcaatgccgttttgaacagtgggcccgggaacctgaccggatgc
agcatttacacggccctgttcccctgtaacgaatgcgccaaggtgatcattcaggtcggt
atccgcgaagtggttttcctttctgacaaatatgccggcaccgattccgttcgcgcctca
agaaggatgtttgaccaggccggcgtggtctgccggcagttgataccggccagcccgaca
atctccatccgattgaccgaaaacggatga
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