KEGG   Desulfosarcina ovata subsp. sediminis: DSCO28_57160
Entry
DSCO28_57160      CDS       T06286                                 
Symbol
truB
Name
(GenBank) tRNA pseudouridine synthase B
  KO
K03177  tRNA pseudouridine55 synthase [EC:5.4.99.25]
Organism
dov  Desulfosarcina ovata subsp. sediminis
Brite
KEGG Orthology (KO) [BR:dov00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03016 Transfer RNA biogenesis [BR:dov03016]
    DSCO28_57160 (truB)
Enzymes [BR:dov01000]
 5. Isomerases
  5.4  Intramolecular transferases
   5.4.99  Transferring other groups
    5.4.99.25  tRNA pseudouridine55 synthase
     DSCO28_57160 (truB)
Transfer RNA biogenesis [BR:dov03016]
 Eukaryotic type
  tRNA modification factors
   Psudouridine synthases
    DSCO28_57160 (truB)
 Prokaryotic type
    DSCO28_57160 (truB)
SSDB
Motif
Pfam: TruB_N TruB_C_2
Other DBs
NCBI-ProteinID: BBO85150
UniProt: A0A5K7ZYI0
LinkDB
Position
6531830..6532735
AA seq 301 aa
MPDKLSGLVVVDKPEGVTSAGVVARVKKIFGARKVGHTGTLDPFATGVLVCCLNRATRLS
RFLLKGDKSYVAELLLGVETDTQDATGQVLCRRPLDHVTAQRVHAMARRFVGEIEQVPPI
YSALKHQGTPLYKLARKGVAVEKPARPVRIDRLEILSVDLPVVRFAVSCSAGTYVRTLCA
DMGRALGCGGHLSWLRRTTSCGFTLDDAMGLEALEARRVQGRLEETVIPMDAALPRMPAM
AADAVLARKIGHGMKLAGTDFPVPPPVENGAFKVVDPHGCLIAVLDATPPDSYNYCCVLS
S
NT seq 906 nt   +upstreamnt  +downstreamnt
atgccagataaactgagcgggctggtggtggtggacaagcccgaaggcgtcacttcggcg
ggtgttgtggcgcgcgtcaagaagattttcggtgccaggaaggttggacacaccggaacg
ctggatccctttgccaccggtgttctggtctgctgcctcaaccgggccacgcggctttcc
cgatttctgctcaagggcgacaaatcctacgtggcggaactgttgctgggtgtcgagacc
gatacccaggatgccacgggacaggttctttgtcgccggccgttggaccatgttaccgcg
cagcgggtgcatgcgatggcgcggcgatttgtcggtgagatcgagcaggtgccgccgatt
tattcggccctgaagcaccaggggacaccgctttacaaactggcccgcaaaggcgtggcc
gtggaaaagccggcccggccggttcggattgaccgattggagattctatcggtcgattta
ccggtcgttcgattcgcggtgtcctgctcggccggcacttatgtgcggaccctgtgtgcg
gacatggggcgggccctgggctgcggcggtcatctttcgtggctgcgcagaaccaccagt
tgcggttttacgctcgacgatgccatggggctggaggcgcttgaagcacgtcgggtgcag
ggtcgccttgaagagacggtgattcccatggacgcggccctgccacgcatgccggcgatg
gcggccgatgccgtcctggccagaaagatcggtcacggcatgaagctggccggtaccgac
ttccctgtgccaccgcctgtggaaaacggggcgttcaaggttgtcgatccccatggctgc
ttgattgccgtactggatgccacaccgccggacagctataattattgttgtgttttatca
tcataa

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