Desulfosarcina ovata subsp. sediminis: DSCO28_57820
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Entry
DSCO28_57820 CDS
T06286
Symbol
gabD
Name
(GenBank) NAD-dependent succinate-semialdehyde dehydrogenase
KO
K00135
succinate-semialdehyde dehydrogenase / glutarate-semialdehyde dehydrogenase [EC:
1.2.1.16
1.2.1.79
1.2.1.20
]
Organism
dov
Desulfosarcina ovata subsp. sediminis
Pathway
dov00250
Alanine, aspartate and glutamate metabolism
dov00310
Lysine degradation
dov00350
Tyrosine metabolism
dov00650
Butanoate metabolism
dov00760
Nicotinate and nicotinamide metabolism
dov01100
Metabolic pathways
dov01120
Microbial metabolism in diverse environments
Module
dov_M00027
GABA (gamma-Aminobutyrate) shunt
Brite
KEGG Orthology (KO) [BR:
dov00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00650 Butanoate metabolism
DSCO28_57820 (gabD)
09105 Amino acid metabolism
00250 Alanine, aspartate and glutamate metabolism
DSCO28_57820 (gabD)
00310 Lysine degradation
DSCO28_57820 (gabD)
00350 Tyrosine metabolism
DSCO28_57820 (gabD)
09108 Metabolism of cofactors and vitamins
00760 Nicotinate and nicotinamide metabolism
DSCO28_57820 (gabD)
Enzymes [BR:
dov01000
]
1. Oxidoreductases
1.2 Acting on the aldehyde or oxo group of donors
1.2.1 With NAD+ or NADP+ as acceptor
1.2.1.16 succinate-semialdehyde dehydrogenase [NAD(P)+]
DSCO28_57820 (gabD)
1.2.1.20 glutarate-semialdehyde dehydrogenase
DSCO28_57820 (gabD)
1.2.1.79 succinate-semialdehyde dehydrogenase (NADP+)
DSCO28_57820 (gabD)
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Motif
Pfam:
Aldedh
AcnX_swivel_put
Motif
Other DBs
NCBI-ProteinID:
BBO85216
UniProt:
A0A5K7ZYJ3
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All DBs
Position
complement(6598846..6600300)
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AA seq
484 aa
AA seq
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MFKLIDKSLFRQQCYINGKWENARSGAIITVSNPADGSVLGSVPDMSHEEVTAAVETAAT
ALPAWRRRTAADRSQALRRWYDLVISNQADLAAIMTAEQGKPLTESSGEIAYAASFIEWF
AEEGKRVYGDTIPAQQPGTRIVVTKEPIGVCAAITPWNFPAAMITRKAAPALAAGCVMLV
KPASQTPLSALALAELAQRAGIPKGVFNVVTGQSSVIGRVFTQNPLVRKISFTGSTEIGR
RLMRDCAGTIKKISLELGGNAPFIVFDDADLDAAVRGAIDCKFRNSGQTCVCANRIFVQE
SVYAEFAEKLASATQALTVGNGSTPGVEQGPLISQAAVEKVEQHIEDALANGANLIAGGQ
RHALGGTFFQPTVLCNVSPDMLIAKEETFGPVAPLLRFEVEGEAVRLANDTEFGLAAYFY
SRDQARVWRVAGALEAGIVGINTGLVSSAVAPFGGVKQSGIGREGSKYGIEEYVEIKYLC
MGGL
NT seq
1455 nt
NT seq
+upstream
nt +downstream
nt
atgttcaagctcattgacaaatcgcttttccgtcagcaatgctatatcaacggcaaatgg
gaaaacgcccgctccggggcgattatcaccgtctccaatcccgcagatggctctgttttg
ggcagcgtaccggatatgagccacgaggaagtgaccgcggccgtggaaaccgccgcaacc
gctctgccggcatggcgcaggcggaccgccgccgatcgcagccaggcgctgcgccgatgg
tacgatctggtgatttccaaccaagccgatctggctgccatcatgaccgccgagcaaggc
aagcccctgacggagtccagcggcgaaatcgcctatgccgcctcctttatcgagtggttc
gccgaagagggcaagcgcgtctatggggacaccatccccgcccagcaaccaggaacgcgc
atcgtggtaaccaaggaaccgattggcgtttgtgctgccatcacaccatggaattttcct
gccgccatgattacccgcaaggcggccccggccctggctgccggctgcgtcatgctggtc
aaaccggccagtcagacccccttatcggccctggctctggcggaactggcccaacgggcc
ggcatccctaaaggggtattcaacgtggttaccggccaatcatcggtgattggccgggtg
ttcacacagaaccccctggtacgaaaaatcagtttcaccggttcaacggagatcggtcgc
cgactgatgcgcgactgcgccggtaccatcaaaaagatatccctggaactgggcggcaac
gcgccgtttatcgttttcgacgatgccgacctggatgcggcagtccggggggcgatcgac
tgcaagttccgcaatagcggtcaaacctgtgtctgcgccaaccggatctttgttcaggag
agcgtctatgcggaatttgccgaaaagctcgcctccgccacccaggcgttgacggtagga
aacggttcgactcccggcgtggagcaggggccgctgatcagtcaggctgcggttgaaaaa
gtggaacagcatattgaagatgccctggcaaacggggccaatctgattgccggtggacag
cgtcatgccttgggcggcacttttttccaacctacggtcctttgcaatgtctctcctgac
atgctgatcgccaaggaagaaaccttcgggccggtggcaccactgctgcgcttcgaggtt
gaaggggaagcggttcgccttgccaatgacaccgaattcggcctggcggcatatttctac
agccgggaccaggcccgcgtctggcgtgtggccggggccctggaggcgggcattgtagga
atcaacacaggccttgtttcttcggcagtagcgccttttggcggcgtcaaacaatctggc
attggccgtgaaggctccaaatacggaattgaagagtatgttgaaattaaatatctatgc
atgggagggctatag
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