Desulfosarcina ovata subsp. sediminis: DSCO28_57980
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Entry
DSCO28_57980 CDS
T06286
Symbol
gabT
Name
(GenBank) 4-aminobutyrate--2-oxoglutarate transaminase
KO
K07250
4-aminobutyrate aminotransferase / (S)-3-amino-2-methylpropionate transaminase / 5-aminovalerate transaminase [EC:
2.6.1.19
2.6.1.22
2.6.1.48
]
Organism
dov
Desulfosarcina ovata subsp. sediminis
Pathway
dov00250
Alanine, aspartate and glutamate metabolism
dov00280
Valine, leucine and isoleucine degradation
dov00310
Lysine degradation
dov00410
beta-Alanine metabolism
dov00640
Propanoate metabolism
dov00650
Butanoate metabolism
dov01100
Metabolic pathways
dov01120
Microbial metabolism in diverse environments
Module
dov_M00027
GABA (gamma-Aminobutyrate) shunt
Brite
KEGG Orthology (KO) [BR:
dov00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00640 Propanoate metabolism
DSCO28_57980 (gabT)
00650 Butanoate metabolism
DSCO28_57980 (gabT)
09105 Amino acid metabolism
00250 Alanine, aspartate and glutamate metabolism
DSCO28_57980 (gabT)
00280 Valine, leucine and isoleucine degradation
DSCO28_57980 (gabT)
00310 Lysine degradation
DSCO28_57980 (gabT)
09106 Metabolism of other amino acids
00410 beta-Alanine metabolism
DSCO28_57980 (gabT)
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
dov01007
]
DSCO28_57980 (gabT)
Enzymes [BR:
dov01000
]
2. Transferases
2.6 Transferring nitrogenous groups
2.6.1 Transaminases
2.6.1.19 4-aminobutyrate---2-oxoglutarate transaminase
DSCO28_57980 (gabT)
2.6.1.22 (S)-3-amino-2-methylpropionate transaminase
DSCO28_57980 (gabT)
2.6.1.48 5-aminovalerate transaminase
DSCO28_57980 (gabT)
Amino acid related enzymes [BR:
dov01007
]
Aminotransferase (transaminase)
Class III
DSCO28_57980 (gabT)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Aminotran_3
Aminotran_1_2
Motif
Other DBs
NCBI-ProteinID:
BBO85232
UniProt:
A0A5K7ZY94
LinkDB
All DBs
Position
complement(6622758..6624002)
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AA seq
414 aa
AA seq
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MTTNQELHDLRSKVIPNGHTSSTTCYVESAKGAIVKDVEGKEYIDFAGGIAVMNVGHSHP
KVVDAIKTQAEKFTHTCFMVHPYDVAVRLADRLCKLTPGSFEKKALFVNSGAEAVENAVK
IARYHTKRPGIVAFENAYHGRTCLTMTMTSKVKPYKSGFGPFAPEIYHAPFGDFEAFKNF
FITGIDVENTAAVVAEPVQGEGGFIAPPDDFFPQVAAFCKEHGILFVADEIQSGMGRTGK
MFAMEHWGIEPDLMTVAKSLAAGMPLSAVVGKKEIMDSVHAGGVGGTYGANPVSCAAALA
VLDIFEEENLLEKSVKIGEKLTATFGVWKEKFDIVSEVRGLGAMRGIALFNADGSPAAEQ
AKQLSKYCYDNGLITLVCGIHGNVIRVLMPLVIEDKQLQRGLDIMEGGLAEVTY
NT seq
1245 nt
NT seq
+upstream
nt +downstream
nt
atgacaaccaatcaagaacttcatgaccttcgttccaaagtcattcccaacggtcataca
agcagcaccacctgctatgttgagtctgccaaaggcgccattgtcaaggatgtggaaggc
aaggagtacatcgactttgccggcggtattgcggtgatgaacgttgggcacagtcatccc
aaggtggttgacgccattaaaacccaggcagaaaagttcactcacacctgtttcatggtc
catccttatgacgtggccgtgcgcctggccgatcggctgtgcaaactcaccccgggaagc
tttgaaaaaaaggccctgtttgtcaactccggtgccgaagctgttgaaaatgcggttaaa
atcgccagatatcatacaaaacggccaggtatcgtcgcatttgaaaatgcctaccacggt
cgaacctgcctgaccatgaccatgacctccaaggtaaagccctacaaatcgggattcggt
ccctttgcccctgagatctaccacgcgccctttggagattttgaagcgttcaagaatttc
ttcattaccggtattgacgttgaaaacacggcagccgtggtggctgaaccggttcagggg
gaagggggcttcattgcccccccggatgatttttttccccaggtggccgccttttgcaag
gaacacggcatcctctttgttgccgatgaaatccagtccggcatgggcagaaccggtaaa
atgtttgccatggaacactggggaattgaacccgacttgatgaccgtggccaagagcctt
gccgccggaatgccactgagcgctgttgtgggcaagaaggaaatcatggattcagttcac
gcgggcggtgttggcggaacatacggcgccaacccggtatcctgtgcggcagcccttgcc
gtcctggacatttttgaggaagaaaaccttctggagaagtctgtcaagattggtgaaaag
ctcaccgcaacctttggggtctggaaggaaaaattcgatattgtcagcgaagtcagggga
ttgggggccatgcgcggtatcgccctgttcaacgccgacggcagtcccgccgccgagcaa
gccaaacagctgtccaaatactgttacgacaacggcctgatcaccctggtttgcggcatc
catgggaacgtcatccgcgtattgatgccgctggtgatcgaggataaacaattgcaacgg
ggattggatatcatggaaggtgggctggccgaggttacttactga
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