Desulfosarcina ovata subsp. sediminis: DSCO28_58840
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Entry
DSCO28_58840 CDS
T06286
Name
(GenBank) IclR family transcriptional regulator
KO
K19333
IclR family transcriptional regulator, KDG regulon repressor
Organism
dov
Desulfosarcina ovata subsp. sediminis
Brite
KEGG Orthology (KO) [BR:
dov00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
dov03000
]
DSCO28_58840
Transcription factors [BR:
dov03000
]
Prokaryotic type
Helix-turn-helix
IclR family
DSCO28_58840
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
IclR_C
HTH_IclR
HTH_27
Dimerisation
TrmB
HTH_24
MarR_2
MarR
HTH_47
Rrf2
HTH_Crp_2
HTH_20
Motif
Other DBs
NCBI-ProteinID:
BBO85318
UniProt:
A0A5K7ZYJ4
LinkDB
All DBs
Position
complement(6724140..6724922)
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AA seq
260 aa
AA seq
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MSETKNTVPAIERAVDVLECISSSDREMSLSDIIEQVDIPRQSLIRILNTLCSKGFLDKS
GKRGLYRIGLKFLYLGHRLHDKYDLRNSAWKHMKALSIQTRKTIELATLDRDQLILLEQI
RGSESMSLYSRVGSAIPYLHAVSVGKVYLSLMSKEKRRQVIKKIGMPAITKYTITDPEIL
ETELIQAKKCGFGFEDQELREGVRRIAAPIFNSSGKHVGCIGISAPIFNFDLKDKEKYGE
LVVDAARKTSADMGYPYDPK
NT seq
783 nt
NT seq
+upstream
nt +downstream
nt
atgagtgagaccaaaaatacggttccggcgatcgaacgtgccgttgatgttcttgagtgc
atctcctcgtctgacagggagatgtcgctttccgacatcattgaacaagtcgatatcccc
cgccagtcgctgattcgaatcctcaacaccctgtgttcaaaagggttccttgataaatcc
gggaaaagaggactctaccggatcggtttgaaatttttgtacttggggcatcgcctccat
gacaaatacgatctgcgtaattccgcctggaaacacatgaaggcgctgtcgattcaaacg
cgaaaaacaattgaactggcgaccttggaccgtgatcagctgatcctgttggagcagatt
cgtggaagcgagagcatgtcgctctattctcgcgttggcagtgccatcccatatcttcat
gccgttagtgtcggcaaggtttatctctccttgatgagcaaagagaaaaggcgtcaggtc
atcaaaaaaataggcatgccggccatcaccaaatatacgattaccgatcctgaaattctc
gaaaccgagcttatccaggcaaaaaaatgcggctttggattcgaggaccaggaattaagg
gagggggtcagaaggattgccgccccgatctttaactcttccggaaagcatgtgggatgc
atcgggatttcagctcccatctttaattttgacctcaaggataaagaaaagtatggtgaa
ctggtggtcgatgccgcccggaagacctcagcggatatgggatacccgtacgatcccaaa
tag
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integrated database retrieval system
