Desulfosarcina ovata subsp. sediminis: DSCO28_59420
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Entry
DSCO28_59420 CDS
T06286
Symbol
priA
Name
(GenBank) primosomal protein N'
KO
K04066
primosomal protein N' (replication factor Y) (superfamily II helicase) [EC:
5.6.2.4
]
Organism
dov
Desulfosarcina ovata subsp. sediminis
Pathway
dov03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
dov00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
DSCO28_59420 (priA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
dov03400
]
DSCO28_59420 (priA)
Enzymes [BR:
dov01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
DSCO28_59420 (priA)
DNA repair and recombination proteins [BR:
dov03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
DSCO28_59420 (priA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PriA_3primeBD
PriA_C
DEAD
ResIII
Zn_ribbon_PriA
Helicase_C
AAA_30
nSTAND_NTPase5
AAA_16
nSTAND3
AAA_22
AAA_25
SLFN-g3_helicase
HTH_24
HypA
AAA_SelU
MarR
SRP54
Pox_A32
Motif
Other DBs
NCBI-ProteinID:
BBO85376
UniProt:
A0A5K7ZYZ6
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All DBs
Position
6782988..6785453
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AA seq
821 aa
AA seq
DB search
MIPVKQKPIRPHRPIVSVAVALPVMDCYSYTVPDHLLALIRTGKRVLIPFGSRTVTGYLI
GSSSEPDSTTLKHILDVLDDAPLFSSAMVPFFQWIATYYMYPLGQVISTALPAGLNLTDI
AVMTLCPPGMAALTSDAVSPLEKTVLTALTKRPMDFRQLKKDVGQRVPWALIHQMRQRGW
LVVERQIKGGQVRRKTIRMVRLAEGVAESGKISPQRQAILDLLRQQGGLSVPDLSKRVPT
AASLVRAMQKAGMVRIEDHPVYRDPFGDPIDPDRPPVLTDEQAEAVNRMTPLLGKGFRTV
LLAGVTGSGKTEVYLQLARQAVDRGLHVLVLVPEIALISQTERRFRARFGETVAVLHSGL
SRGERYDQWLRVARGEAGIAIGARSCIFAPFETVGLIIVDEEHDAAYKQDGGLSYNARDL
AVVRARHQNALAVLGSATPSVQSWHNVAIGKYSTVGLTRRVNRQPLPVIQTVDLSQIRDE
RGIRRYITPLLQQEIQKTLDDGHQTLIFLNRRGFSVFPICAHCGQPLRCKNCDISLTLHK
QANAYRCHYCGFSRPATSTCPACGSDKIKLLGTGTEKIQEAMVQLFPQARVARMDRDTMT
RKGSVVKLLKDLKNRNIDILVGTQMVAKGHDFPGITLVGVVCADLTLNFPDFRAGERTFQ
LLAQVAGRAGRGKQPGKVILQTFNPDHFSITAAKHQDFVTFFNQEIGFRQALGYPPFTRM
IAVRLSGRDPRQTGIHARALGSACQDLLHPEGPFHRQVQVMGPIEAPLARIANQHRWQLL
IKSPDTARLHRFVNQLMLGPNALPTRRDVRVTIDVDPFSLM
NT seq
2466 nt
NT seq
+upstream
nt +downstream
nt
gtgatccctgtcaagcaaaaaccaatccgtccgcatcgaccgattgtttccgttgccgtg
gccctgccggtcatggactgttacagttatacagttccggaccatcttttggcgctgatc
cgcacgggaaaacgggtcctgatccccttcggcagccgcacggtcaccggctatctgatc
ggatccagctcagaaccggattccaccacgctcaagcacatcctcgacgttcttgacgac
gcaccgcttttttcatcggcgatggtcccgtttttccagtggattgccacctattacatg
tatcccctgggccaagtgatcagcacggcgttgccggccggcctgaatctgaccgatatc
gccgtcatgaccctctgtccgccggggatggccgccctcacctcggatgccgtctcccct
ctggagaaaacggttctgacggcgctaacaaagcggcccatggatttccgtcaactgaag
aaagatgtggggcagcgcgtgccatgggcattgattcatcagatgcgtcagcgcggatgg
ctggtggtggaacgccagatcaagggaggacaggtccgccgcaaaacgatccgcatggtc
cgccttgccgaaggcgttgccgagtcaggaaagatctccccccaacgccaggcgattctg
gacctcctgcggcaacaggggggactgagtgttccggatctcagcaagcgggttcccacc
gccgcgtccctggtgcgggccatgcaaaaggccgggatggtccgcatcgaggatcatccc
gtttaccgggatcctttcggagatcccatcgatccggatcggccaccggtgctcaccgac
gagcaggccgaggcggtcaaccggatgacaccgcttctgggaaaagggtttcggaccgtt
ttgctggccggcgtgaccggcagcggcaagaccgaagtatacctgcagctggcccgccag
gcggttgacagggggttgcatgtcctggtgctggttccggaaattgcacttatctcccag
actgaacgccgtttccgggcccgtttcggtgagaccgtggccgtgctgcacagcggactg
agccggggggagcgctacgatcagtggttgcgtgtggccaggggcgaggccggcatcgcc
attggtgcccgatcctgcatcttcgcaccgtttgaaacagtggggctgatcattgtcgac
gaggagcacgacgccgcctacaaacaggatggcggcctcagttacaacgccagggatttg
gccgttgtccgcgcgcgccaccagaacgcactggccgtgctggggtcggcaacgccgtcg
gtgcagtcgtggcacaacgtggccatcggtaaatattcgacggtcgggctgaccaggcgg
gtcaaccgtcagccgctgccggtcatccagaccgtggatctttcgcagatccgggacgaa
cgcggcatccgccgctacattactccccttttgcagcaggagatccagaagaccctggac
gacggacaccagacgctgatttttctcaaccggcgggggttttccgtcttccccatctgc
gcccattgcggccagccgctacgctgtaaaaattgcgatatctcgctgaccctgcacaaa
caggccaatgcgtaccgctgccactactgcggcttttcccggccggccacatccacctgc
ccggcctgcggctccgacaaaatcaaactgcttggtacaggcaccgaaaaaattcaggag
gccatggtccagctttttccccaggcgcgggtcgcccgcatggaccgggacaccatgacc
cgcaaaggatccgtcgtgaaactgctcaaggacctgaaaaaccgcaacatcgacatcctg
gtggggacccagatggtggccaaggggcacgatttcccgggaattaccctggtcggcgtg
gtgtgtgccgacctgacgctcaatttcccggatttccgcgccggcgaacgcacctttcag
ctgctcgcccaggtggcggggcgggccggtcgcggcaagcagccgggcaaggtgatcctg
cagaccttcaacccggaccacttcagcatcacggccgccaagcaccaggatttcgtcact
tttttcaatcaggagatcggttttcgccaggccctgggctaccccccgtttacccgtatg
atcgccgtgcggctgtccggcagggatccccggcaaactggtatccatgcgcgggcattg
ggaagcgcctgccaggacctgctccaccccgaaggcccgtttcaccggcaggtccaggtg
atggggcccattgaagcgcccctggccaggattgccaaccagcatcgctggcagctgttg
atcaaaagcccggacaccgcccgcctgcaccgattcgtcaaccaactgatgctgggtccc
aacgcgctccccaccaggcgcgatgtgcgggtgaccatcgatgtggaccccttttccctg
atgtag
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