Desulfosarcina ovata subsp. sediminis: DSCO28_60930
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Entry
DSCO28_60930 CDS
T06286
Name
(GenBank) hypothetical protein
KO
K08307
peptidoglycan lytic transglycosylase D [EC:
4.2.2.29
]
Organism
dov
Desulfosarcina ovata subsp. sediminis
Brite
KEGG Orthology (KO) [BR:
dov00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
dov01011
]
DSCO28_60930
Enzymes [BR:
dov01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.2 Acting on polysaccharides
4.2.2.29 peptidoglycan lytic transglycosylase
DSCO28_60930
Peptidoglycan biosynthesis and degradation proteins [BR:
dov01011
]
Peptidoglycan biosynthesis and degradation
Lytic transglycosylase
DSCO28_60930
BRITE hierarchy
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Paralog
Gene cluster
GFIT
Motif
Pfam:
LysM
SLT
LysM3_LYK4_5
LysM1_NFP_LYK
NMB0315_dom_I
HTH_Tnp_ISL3
HTH_28
DUF5893
Motif
Other DBs
NCBI-ProteinID:
BBO85527
UniProt:
A0A5K7ZZ41
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Position
complement(6959239..6961101)
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AA seq
620 aa
AA seq
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MSIKYIHRYVFVILWLLILVQGCAHPTARNGDPGSPPAVPMVEPGAIIDDNGKTPPAPPA
IIGSDAMNAAGVSENTGVATNPVAHMGETDLSDIAGGDAAPPIHTAQHNLDEALDFCDAA
QEFWQNGELESALEALDKAYSLILNLEPDSPDKLIQQKEDLRFLISKRILEIYASRNIVV
NGNHNAIPRDLNANVQKEINLFTKGPEKRFFIESYRRSGKYRDMIVSKLEAAGLPTELSW
LPLIESGFKVQALSRARALGLWQFIPSTGYKFGLKRNQYIDERIDFEKSTDAAIAYLKEL
HGIFGDWATVLAAYNCGEGRVLHVIRTQNINYLDDFWDLYGRLPYETARYVPRFLATLHV
IENAEKYGLNCIEPDPALAFEKVAVHRRVHLKNLAPALGLSVGTLKELNPELRYSILPDA
KYPLRVPAGQKALVLASIDKVPVYTPPTPAFAYHRVRKGETLSSIARRYGTSVKQIMRAN
RLRRSGYIVAGQRLKVPRRGTTVSASRAPATAKVWNRKHVVKSGDSLWIIAKRYGTTTKR
IQEMNKLKGTMLSIHQVLRVPSATTRTSRSAKQSETYYVQKGESPYLIARKYNMSLNHFL
KLNNLTPRSTIYPGQKVIVD
NT seq
1863 nt
NT seq
+upstream
nt +downstream
nt
ttgtctattaaatatattcaccgttatgtattcgtgatcctctggctgctgatccttgtc
caggggtgtgcccacccgaccgcgcgaaacggcgatcccggttccccgccagccgttccg
atggtggaaccgggtgccatcatcgacgacaacgggaaaacccctcccgcaccgccggca
atcatcggttccgacgccatgaacgcggccggggtttccgagaacacgggagtggccacc
aatccagtggctcatatgggggaaaccgaccttagtgacattgccggtggcgatgcagcg
ccgccgatccacaccgcccagcataacctggacgaggctctcgacttctgcgatgccgcc
caggaattctggcagaacggggaattggaaagcgccctggaagcgcttgacaaggcttat
tcgctaatcctcaacctcgagccggacagcccggacaagctgatccagcagaaagaagat
ctccggtttctgatttccaaacggattcttgaaatttacgcatcgcgcaacattgttgtc
aatggaaaccacaatgcgattccccgagatctcaacgccaatgtccaaaaagagatcaac
cttttcaccaaaggaccggaaaaacgttttttcatcgagtcctatcgtcgttccggaaaa
taccgtgacatgatcgtcagcaaactggaggccgccggcctgcccacggaactgtcctgg
ctgccgttgattgaaagcggtttcaaggttcaggccctttcccgggctcgggcactggga
ctctggcagttcatcccttccaccggttacaaattcggtttaaagcgcaaccagtacatt
gatgaacgcatcgactttgaaaaatcaacggacgcagccatcgcctatctcaaggaactc
cacgggatttttggcgactgggcgaccgtattggccgcttacaactgtggtgaagggcgg
gtcctgcacgtcatccggacacaaaacatcaactaccttgacgatttctgggacctctac
ggccgtctgccctacgaaaccgcccgctatgttccccgttttctggcaaccctgcacgtt
attgagaatgcagaaaaatacggtcttaactgcatcgaacccgacccggccctggccttt
gaaaaagtggccgttcatcgccgggtccacctgaagaacctggcgcccgcgctgggcctg
tcagtgggaaccctcaaggaattgaaccctgaacttcgctacagcattctacctgacgcc
aagtatccgttgcgggtgccggcaggccagaaagcgctggtgctggcaagcatcgacaag
gttccggtgtacacccctccgacaccggccttcgcctaccaccgcgtccgaaagggcgag
accctctcctcaatcgccagacgatatgggaccagcgtcaagcagatcatgcgggccaat
cgcctgaggcgctccggctatatcgttgccggccagagactgaaggttccccggcgggga
acaacggtcagcgcatcacgcgcgccggcaacggccaaggtgtggaaccgcaagcatgtg
gtcaaaagcggcgactccctctggatcattgccaagcgctatggcacgacgacaaaacga
atccaggaaatgaacaagctgaaaggaaccatgctgagtatccatcaggtattgcgggtt
ccctcggcaacgacgcgcacctcacgatcagccaaacaatccgaaacctattacgtgcaa
aaaggcgaaagtccttatctgatcgcccgcaaatacaacatgtccctcaaccatttcctg
aagctcaacaacctgaccccccgcagcacgatctacccgggacaaaaggtcatcgttgac
tag
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