Desulfosarcina ovata subsp. sediminis: DSCO28_61320
Help
Entry
DSCO28_61320 CDS
T06286
Symbol
rpoA
Name
(GenBank) DNA-directed RNA polymerase subunit alpha
KO
K03040
DNA-directed RNA polymerase subunit alpha [EC:
2.7.7.6
]
Organism
dov
Desulfosarcina ovata subsp. sediminis
Pathway
dov03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
dov00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
DSCO28_61320 (rpoA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
dov03021
]
DSCO28_61320 (rpoA)
03400 DNA repair and recombination proteins [BR:
dov03400
]
DSCO28_61320 (rpoA)
Enzymes [BR:
dov01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
DSCO28_61320 (rpoA)
Transcription machinery [BR:
dov03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
DSCO28_61320 (rpoA)
DNA repair and recombination proteins [BR:
dov03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
DSCO28_61320 (rpoA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_A_bac
RNA_pol_L
RNA_pol_A_CTD
Motif
Other DBs
NCBI-ProteinID:
BBO85566
UniProt:
A0A5K7ZZH3
LinkDB
All DBs
Position
6990815..6991834
Genome browser
AA seq
339 aa
AA seq
DB search
MSKNELMYMNWREMIKCDKVRVSSNDAYGKFVCEPLERGFGITLGNSLRRTILSSLYGAA
IVSVRFESVEHEFSVIPGVIEDVSEVILNLKEVRLKMDDATPRTIRVEATGEGPVYAGTI
TSDDGHVEILNPDQQIATIAGTGKLNMEMVVKVGKGYSLAEANKDEDAPIGTIPIDAVFS
PIKRVNYVVGNARVGQRTDYDKLTLEVWTDGSVTPEDAVAFGSKILKEQLSIFINFDEDA
EPLTESDEDNQEKPAFNDNLYRSVEELELSVRSANCLKNAEILKIYQLVQKTEAEMLKTK
NFGRKSLNEIKDVLAEMGLSLGMKLDSFEPPEESVEEGE
NT seq
1020 nt
NT seq
+upstream
nt +downstream
nt
atgtctaaaaacgaacttatgtacatgaactggcgcgagatgatcaagtgcgataaggtc
cgcgtcagcagcaacgatgcatacgggaaatttgtatgcgaaccattggagagagggttc
ggcataacattaggtaactcgttgagaagaaccattctgtcctccttgtacggtgctgca
attgtttccgtccggttcgagtccgttgaacatgagttcagtgtcatacccggtgttatt
gaggatgtgtcggaagtcattctgaacctcaaagaagtccggcttaaaatggacgacgca
acaccaaggaccatcagagtagaagcgacgggtgaaggtccggtatatgccggtacaata
accagtgacgacggacatgtcgagatcctcaaccccgatcagcaaatcgccacgatcgct
ggtaccggtaagctgaatatggagatggtagtaaaggtggggaagggatactctctcgct
gaagccaataaagatgaggatgcaccgattggcacgattcccattgatgctgttttctcg
cccattaaacgggttaactacgtcgttggcaatgctcgtgtcggccaacggactgactat
gacaagttgaccctggaagtctggactgacggaagtgttacgccggaggacgctgttgcc
tttggttcaaagatactcaaagagcagctcagtatttttatcaacttcgatgaagatgcc
gaaccgcttaccgaaagcgatgaagataaccaggaaaagccggcctttaacgacaacctc
taccgtagcgtagaagagcttgagttgtctgtccgaagtgccaactgtcttaagaatgca
gaaatcctgaaaatctaccagttggttcagaagaccgaggcggagatgctcaaaacgaag
aattttgggcgtaaatcactcaatgaaatcaaggacgtcttggcggaaatgggtctctcg
ttgggcatgaagcttgacagtttcgaaccgcctgaagaatccgtcgaagaaggggagtaa
DBGET
integrated database retrieval system
