Desulfosarcina ovata subsp. sediminis: DSCO28_61610
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Entry
DSCO28_61610 CDS
T06286
Name
(GenBank) DEAD/DEAH box helicase
KO
K06877
DEAD/DEAH box helicase domain-containing protein
Organism
dov
Desulfosarcina ovata subsp. sediminis
Brite
KEGG Orthology (KO) [BR:
dov00001
]
09190 Not Included in Pathway or Brite
09194 Poorly characterized
99996 General function prediction only
DSCO28_61610
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Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
MZB
ResIII
Cas3-like_C_2
Zn_ribbon_RRN7
Motif
Other DBs
NCBI-ProteinID:
BBO85595
UniProt:
A0A5K7ZZ78
LinkDB
All DBs
Position
complement(7024605..7031231)
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AA seq
2208 aa
AA seq
DB search
MLPAHIAQNIRRQILYYLQSTFSFRDKKVEGAFQRFLEDPESGIYKGPWVQLKRPFRPAP
EGVAMPFDIEVPFHPFLHQYRAWKRLSAKSGAARNTIVTTGTGSGKTECFLFPILDHCLR
TKKQGQSGIKAIILYPMNALAADQEKRFAAAIWDDPALKSAGIRVGNYTGRYDPADPGKS
QDSGYKEMGPGHGITNHEAQQENPPDILLTNYRMLDFLLMRPQDKRLWRFNGPDVLKYLV
LDELHTYDGAQGADVACLIRRLKDRLSIPTGRLCVVGTSATLDDRELLKEIQADGSADAA
EAGKDRLAAFAATLFEEEIPVEAVIGEDRLSVEQIVHSDLREVAFPNPQTCHPLEDEDSL
RYVIRQSQNWGGPVCEPASHENGEGQAGQSDAAIEQWELELGHWLKHRVLFKYLLEVFHA
AEIRREDPLAWTELVDRLTRKDFGLQAIDKAADRQIVVASFCSLVAHARELRSKRSSVLV
PTQVQLWIRELRRLGRIVSRVPVFAWLDEPVPNTKSLPAFHCSECGESGWVALHDPDQDS
QINSREVSGWAMESDPSRIYRGWFGTTDQQSGVNRKSQYIFVISPDDSSGIKGDEPALRQ
MPLTALDAEDLYFCPESLVIRRGDGPCPLTGDTRNFKVRVSNATRRMQNGQVVGAQRCPR
CGSAEGLFFIGAQSAILASVAIDEMFGSILNSDPKLLAFTDSVQDASHRAGFFSSRTYHF
TFRTALQHVVNAGASGGGSADGIGGAHNGLKLTKTGRRLFDYWSREEPGRPGSVRETMTA
LMPPDLHDYKPFRDFRNNPALAKPPSRLLDEITRRLTWQAISEFGLMQTHGRTMELNGSA
CLGWDETIISDTIRRLQEKLPGINPVLARIDDDHLRIWIYGMLHRYRERGGLYHSYLDAF
ARHGFWGKYPVGRIIEGRETYPSAIRYKPKLLVTTPQRDHEHVLAHTRGGQQPWHIRWAY
RALGEPAVLEADIIDAIQAFLICGNDAGLLMCLHKDGSKDYYAISSEAAWLVPHGICLAC
DETDRYIVRPEPEANFWKNAPSMEYYATRGRYVVRQFDARQRYYQDRYHKGALRRVVAEE
HTGLLATEEREKVETCFKKSEHADDPNVLTCTSTLEMGIDIGDLSSTMLCSIPPNTASYL
QRIGRAGRATGTALIVSVVNQRPHDLFFYARPMEMLKGKVDPPGCWLDASAVLVRQYLGY
CFDSATREDMLNKIPTSCGQLVEDLNHTDGHIPAAMAWVTANEMELQNSFLRRYRHTVQE
DTRQRFLKDTDTQLLIQKMHQATQEFDRMQRDLDNARKRLNDQLSKLDTEEKDARIEIQR
ELRIIKARRNSLSRTTTLELFTDHGLLPNYAFPERGVRFYGAIYNKHRHADQEYKPVEIY
RNATSALKELAPYNTFYTHRRQFDVQQIVIGNPQQLLTESWAVCGLCGHMRRLEELSQPD
ANPACPQCGHSVGRGSQLEIGQHRQFIEFSQSQALSYMEHYESLSGDRDEERQRGYYDVI
ASFDQTKERSAGAVGDDSLPFGIEYRSSMILRVINTGYLVDQKDIPFGPDTFISDEGFQI
CQHCGIAIPPHLTPQNDIAALHRRSCQGRRKAEKLRQEGKDGQTAFQYLPLYLYRQLKSE
AIRLLLPLADGEDVDTLVACIYLGLRLRFEGNPAHLIVQPQIMPEPSSGITKHYLVIMDA
VPGGTGFLKALYQEKDDKGREGEGIMDVLRRARDTLETCPCRKFVQQDEMEDTDGCYRCI
RTYHLQYKADQISRERGIKLLSRLIESGAQRVDKRELEQIKADSLYGSVLEKKFVDALRS
FVEDRKGSWSETIIKGSQGFRFSLPDSERLWELELQPSLGAAQGVLVQSQPDFLLSCDDD
GIKPVAIFSDGFEYHCFPNNRLADDMNKRRAILESGNYRVWGVTWEDVTNENQTHEMVCH
PQLAGYLVKYQQSLSQKHKDEIPHATKFVGNGMQQLKAFLSAPSEIGWKLIADYIIFHPL
LLLADKRKVKYSELQAAFEGWRMGGAMSPLSSDKNGEWIYNDRASLTQDFIAYITTENAI
IHAKDKAGIIGRLGDSEQEVSGSDYKERWRRFLACINAFQFTDSFSFWTSSEAMENTAPE
IVFEGEYEIAEGWKDVLEETISRLKPVVEALAKAGLPIPKVEFTNDDIDDDAFAELAWEG
GNGKIVILAGDQQGFANQWQNQGWRVTLPDEIEIKGVDWLIDEIRKIA
NT seq
6627 nt
NT seq
+upstream
nt +downstream
nt
atgctaccagcccacatcgcccagaacattcgccggcagatcctgtactacctccaatcg
accttttcgttccgggacaagaaagtcgagggtgcctttcaacgctttctggaagacccg
gaatccggtatctataagggaccctgggttcagctcaaacgtccctttcgcccagcgccc
gaaggggtggccatgccttttgatatcgaggtgccgtttcacccctttttgcatcaatac
cgggcctggaaacgcttgtctgcaaaatccggcgcggcccggaataccatcgtcactacc
ggtacgggatcgggcaagaccgaatgtttcctgtttcccattctggatcattgcctgcgg
accaaaaagcagggccaaagcggaatcaaggccatcattctctaccccatgaacgccctt
gccgcagaccaggaaaaacgatttgcggccgctatctgggacgatccagcactcaagtcc
gccggcatccgggtgggcaactataccggccgctatgatcccgctgatcccggcaagagc
caggacagtggctacaaggagatgggtccgggccacggtatcaccaaccatgaagcccag
caggaaaatccgccggatattttgctgaccaactaccgcatgctcgattttctcttgatg
cgcccccaggataaacggctttggcgatttaacggacctgatgtgttgaaatacctggtg
ctggacgaattgcacacctatgacggcgcccagggcgcggacgtggcctgtctgattcgc
cggctaaaagaccgtttgagcattcccacgggcaggctgtgcgtggtgggcaccagtgcg
acgctggatgatcgagaactgcttaaagagatacaggccgacggttcggcagacgccgcc
gaagcgggcaaggatcgactggctgcctttgccgcaacgcttttcgaggaagagatcccg
gtagaagccgtcatcggcgaagatcgtctcagcgtggaacagattgtccattccgatttg
agggaggttgcgttccccaacccgcaaacctgccatcccttggaggatgaggattcgttg
cgttatgtcatccgccagtcccaaaactggggcgggcccgtgtgcgaaccggcgagccat
gagaatggtgagggacaagctgggcaaagcgatgcggcgattgaacagtgggaactggaa
ctggggcactggctcaagcacagggtattgttcaaatatttgctggaggtttttcacgct
gcggaaatccgtcgcgaagacccgcttgcctggaccgaactggtggatcggctgacccgc
aaggatttcgggcttcaggcaatcgataaagcggcagatcggcagatcgtcgtggcgtct
ttttgttccctggttgcccacgccagagagctgcgcagcaagcggtcctcggtcctggtg
cccacccaggtgcagctatggatacgcgaattgcggcgtctggggcggattgtatcccgg
gtgccggtttttgcatggctcgatgaaccggtgcccaataccaaaagcctgcctgctttt
cattgcagcgagtgcggcgaatccggttgggtggcgctgcatgacccggatcaggattcc
caaattaactcccgcgaagtctccggatgggcgatggagagtgatcccagccggatctac
cgtggctggttcggcaccaccgaccagcagagtggggtaaaccgcaaaagccaatatatc
tttgtgatcagcccggatgacagttccgggataaaaggggatgaacccgccctcaggcag
atgcccttgaccgccctggatgccgaggacctctatttctgccccgaaagcctggtgatc
cgaagaggagacgggccgtgtccactcaccggcgatacccgtaattttaaggtccgggtg
agcaatgcgacccgtagaatgcaaaacggacaggtggtgggggctcagcgctgcccccgc
tgcggatcggccgaaggtcttttttttatcggtgcccagtccgccatcctggcaagtgtg
gccatcgatgaaatgtttggatccattctcaacagcgatccgaagctgctggcctttacc
gacagcgttcaggatgcttctcaccgagccggtttcttctcatcacgcacctatcatttt
acgtttcgcaccgcattgcagcatgtcgttaacgccggtgcgtcaggcggcggttcagca
gatggaattgggggagcgcacaatggcttaaaattgaccaagaccggccgacgcctgttc
gattactggtcccgggaggaacctggccgaccgggaagtgttcgtgaaaccatgaccgcc
ctgatgccgccggatcttcatgattacaagccgtttcgtgattttcgcaacaatccggcc
ttggcgaagcccccatcgagattattggatgaaattacccgccgcctcacctggcaggct
atcagtgaattcggactaatgcagacccatggacgcaccatggaattgaacggcagtgcc
tgtctcggatgggatgaaaccattattagcgatacgattcggcgacttcaggaaaagctg
cccggtatcaacccggtgttggccaggatcgatgacgatcacctgcgcatctggatttac
ggcatgctgcatcgctatcgggaacgggggggcttgtatcattcctatctggatgccttt
gcacggcatggtttctggggtaagtaccccgtcggccggatcatcgaagggcgcgagacc
tacccgtcggctatccgctacaaaccaaaactactcgttaccacgccacagcgagaccat
gaacatgtgctggcgcatacacgcggcggacaacagccatggcatatccgctgggcctat
cgcgcacttggagaacctgccgttctcgaagcggacatcatcgatgcgattcaggcgttt
ctcatttgtggaaacgatgccggccttttgatgtgcttgcataaagatggatcaaaagat
tactacgccatatcttcggaagccgcctggttggttccccatggcatttgcctggcatgt
gatgaaactgaccgctatatcgtcaggcccgagccggaagcaaatttctggaaaaatgcg
cccagcatggaatattacgccacccgggggcgctatgtggttcgtcagttcgatgcccgc
cagcgatattatcaggatcgataccataaaggcgcgttgcggcgcgtggtggccgaggag
cacacagggcttttggccaccgaagaacgtgagaaagtggagacttgctttaaaaaatcc
gagcatgccgacgatcccaacgtgttgacctgcaccagtacattggagatggggattgat
atcggcgatctttccagcacgatgttatgttccattccgcccaatacggccagttatctt
cagcgtattggtcgtgccgggcgtgccaccgggacggcgttgatcgtgtccgtcgtcaac
cagcggccccatgacctgttcttttacgcccgacccatggaaatgctcaaaggcaaagtg
gacccgcccggttgctggctggatgcctctgccgttctggtccgccagtatctggggtat
tgttttgacagcgcaactcgggaggacatgcttaacaagattcccaccagctgcgggcag
ttggtggaagatttaaaccataccgatggtcatatccccgcggcaatggcctgggtgacg
gccaatgaaatggagctgcaaaacagtttccttagacggtatcgtcataccgtccaggag
gatacccggcaacgctttttaaaggatacggatacccagttgctcatccaaaaaatgcac
caggccacccaagagtttgaccggatgcaacgcgatttggacaacgcccgcaaacggctc
aatgaccagctcagcaaactggatacggaagaaaaagatgcccgcatcgaaatccagaga
gaacttcgaattatcaaggctcgccgtaacagcctcagccgaacaacgaccttggaactg
tttaccgatcacggcttgctgcccaattacgcctttcctgaacgcggcgtgcggttctat
ggcgcgatttacaacaaacatcgccatgcagatcaggaatacaagccggtagagatctac
cgtaatgccacctcagcgctcaaagagcttgccccatacaacacattctacacccaccgg
cgtcagttcgatgttcaacagatcgtgatcggcaatccccaacaactcctcacagagtca
tgggcggtttgcggtttgtgcggtcatatgcgcaggctcgaagaattgagccagcccgat
gcgaatccggcttgcccgcaatgcggccattccgtggggcgtggcagccaattggaaatc
ggccagcatcggcaatttatcgagttttcccaatcccaggcactgtcctacatggaacac
tatgagagcctgtctggcgatcgagacgaggaacgccaaagggggtattatgatgtcatc
gcctcttttgatcaaaccaaggaacggtcggccggggcggtgggtgatgacagcctgcct
tttggaattgagtatcgctcttcgatgatcctgagggtcatcaataccggctacctggtg
gatcaaaaagatattcctttcggcccggatacgtttatatctgacgaaggtttccagatc
tgtcagcactgcggcattgccattccaccacaccttacgccccaaaacgatatcgcagca
ctacaccgccgcagttgccaggggcgcagaaaagccgagaagctgaggcaggaaggcaaa
gacggtcaaacggcatttcagtatcttcctctatatttgtaccgccaattaaaatccgag
gccattcggctcttgttgccactggccgacggtgaagatgtggataccctggtggcctgt
atctacctgggcctgcgactgcgatttgaagggaatcctgcgcatctgattgttcagccc
cagattatgcccgaaccatcctcgggcatcaccaagcattacctggtcatcatggatgcg
gtgcccggcggcaccggttttctaaaagctttatatcaggaaaaggatgacaaggggcgc
gaaggtgaagggattatggacgtactgagacgggccagggatacccttgaaacctgtcca
tgccgtaagtttgttcaacaggatgaaatggaggataccgatgggtgttatcggtgtatt
cgaacctaccatcttcagtacaaggccgaccaaatcagccgcgaaaggggtataaaactg
ttaagccggctcattgagtctggtgcgcaacgggtcgacaagcgtgaattggagcagatt
aaggcggattcgctttacggcagtgtgctggaaaagaaattcgtcgatgccctgcgttcc
tttgttgaagaccgcaagggatcgtggtctgaaaccattattaaaggcagccagggattt
cgtttttcattgcccgattctgaacgtttgtgggaacttgaattgcaaccgtcattaggc
gcagcccaaggcgtgctggtacagtcacagcctgatttcctgctctcttgcgatgacgat
ggcatcaaaccggtggctattttttcggatggcttcgaatatcactgcttcccaaacaac
cgactcgccgacgatatgaataaacgcagggcaattctggaaagcggcaattacagggtt
tggggggtgacctgggaagatgtcaccaatgaaaatcagacccacgaaatggtttgccat
cctcaattggccggctatctggttaaataccagcagtccctttctcaaaagcataaggat
gagattccccacgccacaaaatttgtgggaaacggcatgcagcaactcaaggcgtttctg
agcgcaccgagtgaaatcggatggaaactgatcgcagattacatcatttttcatccgttg
ttgttgttggccgataagcggaaagtaaaatattcggaattacaagccgcgtttgaaggg
tggcgtatgggcggcgccatgtcaccattgtcgagcgataagaacggtgaatggatatat
aacgatcgcgcctctctcacccaggattttatcgcttacattacgaccgaaaacgctatt
atccatgccaaggataaggctggcattattggtcgattgggcgacagcgaacaagaagtg
tcgggtagtgattacaaagaacgctggcgtcgcttcctggcatgtatcaacgcatttcaa
tttaccgattcattcagtttttggacgtcaagtgaagccatggaaaatactgctccggaa
atcgtgttcgaaggagaatacgaaattgcggaggggtggaaggatgttcttgaagaaacc
atttcgcgtttaaagccggtagtggaagccttggccaaagcggggttgcctattccaaag
gttgaattcacaaatgatgatattgatgacgatgcctttgccgaactggcatgggaaggc
ggaaacggtaaaatcgtcatactggccggcgaccagcaagggtttgcaaatcaatggcag
aaccagggatggcgggtaacgctgccggatgaaattgagatcaagggtgttgattggctg
atcgatgagatcagaaagatcgcataa
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