Desulfosarcina ovata subsp. sediminis: DSCO28_71490
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Entry
DSCO28_71490 CDS
T06286
Name
(GenBank) long-chain fatty acid--CoA ligase
KO
K01897
long-chain-fatty-acid---CoA ligase [EC:
6.2.1.3
]
Organism
dov
Desulfosarcina ovata subsp. sediminis
Pathway
dov00061
Fatty acid biosynthesis
dov00071
Fatty acid degradation
dov01100
Metabolic pathways
dov01212
Fatty acid metabolism
dov02024
Quorum sensing
dov04146
Peroxisome
Module
dov_M00086
beta-Oxidation, acyl-CoA synthesis
Brite
KEGG Orthology (KO) [BR:
dov00001
]
09100 Metabolism
09103 Lipid metabolism
00061 Fatty acid biosynthesis
DSCO28_71490
00071 Fatty acid degradation
DSCO28_71490
09140 Cellular Processes
09141 Transport and catabolism
04146 Peroxisome
DSCO28_71490
09145 Cellular community - prokaryotes
02024 Quorum sensing
DSCO28_71490
09180 Brite Hierarchies
09181 Protein families: metabolism
01004 Lipid biosynthesis proteins [BR:
dov01004
]
DSCO28_71490
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
dov04147
]
DSCO28_71490
Enzymes [BR:
dov01000
]
6. Ligases
6.2 Forming carbon-sulfur bonds
6.2.1 Acid-thiol ligases
6.2.1.3 long-chain-fatty-acid---CoA ligase
DSCO28_71490
Lipid biosynthesis proteins [BR:
dov01004
]
Acyl-CoA ligase
Long/very long chain acyl-CoA ligase
DSCO28_71490
Exosome [BR:
dov04147
]
Exosomal proteins
Exosomal proteins of breast milk
DSCO28_71490
Exosomal proteins of breast cancer cells
DSCO28_71490
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AMP-binding
AMP-binding_C
AMP-binding_C_3
Motif
Other DBs
NCBI-ProteinID:
BBO86583
UniProt:
A0A5K8A203
LinkDB
All DBs
Position
8168179..8169816
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AA seq
545 aa
AA seq
DB search
MDRYACWQQVWPEGVPQNIEADKPFTEYFRDRATERPDAVAIYFYGYEIDYATLNRKIDQ
FANALIDRGLNKGDRVGVFLQNSPHYVISFFGVIRAGGIVVNLNPMFKAMELDPIIEKTG
IETIIVQDSLFAELNKTINLPSSERVIVARLSDYIPENPQFSPPPEALGTNESFPGTVDF
QELIASGKPESVCRVDDMDADLAMLQLTGGTTGVPKAAMISVRAFTLAVLINRAWYRLTT
ADTSLGVAPFFHIMGLQATMVPCLVSGCTLLVITRFDPQTIARVIAERGCSVWVAAPTML
TALVNMPEIEGFDFSSLRVIVTGGSPISLSLQQRIKALAPNSQLGEGYGMTEILASGGVH
TPLGRWKEGFCGIPMINDLKIVDLEMGEKEMPPNQEGEIVIKGSTVMQGYWNQPEETRDV
FRDGWFYTGDIGFLDEEGYLKIVDRKKELILCSGFNVYPSDLENIMSRHPAILEVAVIGV
PDDYRGESPKAIVILKDEYQDKVTEKDIVDWCRENMASYKRPREVEFQQALPKSGAGKIL
KRLLN
NT seq
1638 nt
NT seq
+upstream
nt +downstream
nt
atggacagatatgcgtgttggcaacaggtatggccggaaggggttccacaaaacatagag
gcagacaaaccgtttaccgagtatttcagggaccgggcaaccgagcgaccggatgccgtg
gccatctacttttatggctatgagatcgactatgcgacgctgaatcgcaagatcgatcaa
tttgccaatgctttgatcgaccggggattgaacaaaggcgatcgggtcggtgtttttctg
cagaacagcccccattacgtgatcagtttcttcggggttatccgtgccggtggcatcgtg
gtcaatctcaaccccatgttcaaagccatggaactggatccgatcatcgaaaaaaccggg
atcgagaccatcatcgttcaggacagcctattcgcggaactgaacaaaacaatcaatctt
ccctcctccgagcgggttattgtggcccggctgtccgactatattccggaaaatccgcag
ttttccccgccgcccgaggcactgggcaccaacgaatcctttcccggaaccgtcgatttc
caggaattgatcgcctcggggaagccggaatcggtgtgtcgcgttgatgatatggatgcg
gatctggccatgctccagttgaccggcggcaccacaggcgtgcccaaggcggccatgatc
agcgtacgcgccttcaccctggccgttttgatcaaccgggcttggtaccgtttgacgaca
gcggataccagcctcggggtggcgccgttcttccacatcatgggactgcaggcgaccatg
gtgccgtgcctggtgtcgggttgcaccctgttggtgattacccgttttgatccgcagacg
atcgccagggtcatcgccgagcggggttgttcggtctgggtggcggcccccaccatgctg
accgccctggtcaacatgccggagatcgagggattcgacttctcttctttaagggtcatc
gttaccggtggttcgccgatttcgctcagcctacagcagcgcattaaagcactggcgccc
aacagccaactgggtgagggttacggtatgaccgagatcctcgcctcgggcggcgtgcat
accccgcttggccgatggaaagaggggttttgtgggattcccatgatcaacgaccttaaa
atcgttgatcttgaaatgggggaaaaggagatgccacccaatcaagaaggcgaaattgtc
atcaaaggatccacggtcatgcagggatactggaaccagccggaggaaacccgggacgtc
ttccgcgacggttggttctataccggcgacatcggttttttggatgaagagggctatctg
aaaattgtcgaccgaaaaaaggagttgattctctgctccggattcaatgtctatcccagc
gacctggagaacatcatgagccgccatcccgccatcctcgaagtggccgtgatcggcgtt
cccgatgattaccggggagagtcgcccaaggcaattgtgattttgaaagatgagtatcag
gacaaggtcacggaaaaggacatcgttgattggtgccgggaaaacatggcttcctacaag
cgcccccgggaagttgaattccagcaagccctgcccaagtccggtgcgggtaagatatta
aaaagattgctgaactga
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