Desulfosarcina ovata subsp. sediminis: DSCO28_72350
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Entry
DSCO28_72350 CDS
T06286
Symbol
uvrA_2
Name
(GenBank) UvrABC system protein A
KO
K03701
excinuclease ABC subunit A
Organism
dov
Desulfosarcina ovata subsp. sediminis
Pathway
dov03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
dov00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
DSCO28_72350 (uvrA_2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
dov03400
]
DSCO28_72350 (uvrA_2)
DNA repair and recombination proteins [BR:
dov03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
DSCO28_72350 (uvrA_2)
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
DSCO28_72350 (uvrA_2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrA_inter
UvrA_DNA-bind
ABC_tran
AAA_21
AAA_16
AAA_29
SMC_N
AAA_23
AAA_25
DnaJ_CXXCXGXG
nSTAND3
AAA_33
ATPase
nSTAND1
RsgA_GTPase
AAA_22
NACHT
AAA_18
APS_kinase
DUF4350
AAA_15
Motif
Other DBs
NCBI-ProteinID:
BBO86669
UniProt:
A0A5K8A293
LinkDB
All DBs
Position
complement(8257770..8260616)
Genome browser
AA seq
948 aa
AA seq
DB search
MTALNTITIEGARQHNLKDISLCLPRNQLVVITGLSGSGKSTLAFDTLYAEGQRRYVESL
STYARQFLERLEKPDVDLIEGLSPAIAIEQKTASHNPRSTVGTVTEIYDFIRLLYARTGV
AHCYRCGRPILSQSIDEMVTAVMQRPEGARLLVLAPLHHDPSSGHKGLFKRLRKEGFARI
RMDGKIYDLESLGDAAGIHPQQIDVVVDRLILKSTIRNRLADSMELAIGRSEGQVAVAFV
GERMDSVEETLRFSETAACLRCGISYPELSPSSFSFNSPHGACPHCDGLGIVRAFSPARI
VPNPELSLREGAVAVWAQRHSVAFAEFLEDLTTFYGVDIYTPYQDLPDHFRSVLMHGSGD
QKIPFGSAGHATKTPKPFEGILAQLSRQYAEAGSTAEKNALAEYMAEDACPHCHGSRLRR
ESRQIKIDGIPIFELTARSISDLLRFFKAHHPDGKRRLIAEKIVKEIVARLAFLEDVGLG
YLTLDRPAHTLSGGESQRIRLATQIGAKLTGVLYVLDEPSIGLHQRDNSRLLGTLTRMRD
MGNSVLVVEHDEETILAADHVVDMGPGAGMKGGHVVFQGTPAQLLGDAHSLTGRYLSGRL
RIDLPERRRPADQGSIRITGACQNNLKNIDVTFPLGVLTCVTGVSGSGKSTLVIETLYRA
ARRRLQQLNLSAGHFGAIAGLERVDKIIDIDQSPIGKTPRSNPGTYTGLLAPIRDLFSRT
PEARMRGYKPGRFSFNMRGGRCEACGGDGIIRIEMHFLPDVYVPCDVCRGKRYNRETLEI
RYKGRNIAEVLAMTVNQGLAMFQNVEAIRTKLQTLADVGLGYVPIGQSATTLSGGEAQRI
KLARELSRRSTGNTLYILDEPTTGLHPDDIRKLLGVLGRLVDAGNTVVIIEHNLDVIKTA
DHVIDLGPEGGDGGGFIVATGTPEDICQVEDSHTGRYLKKVLGNRLPS
NT seq
2847 nt
NT seq
+upstream
nt +downstream
nt
gtgacagccctgaacaccataaccattgagggcgccaggcaacacaacctgaaagatatc
agtctttgcctgccgcgcaaccaactggtggtcatcaccgggctttccggctccggaaag
tcgacccttgcctttgacaccctttacgccgaaggccagcgccgctatgtggagtccctc
tccacctacgccaggcagttcctggaacggctggaaaaacccgatgtggacctgatcgaa
ggcctctccccggccattgccatcgaacagaaaacagccagccacaacccgcgttcaaca
gtgggcacggttaccgaaatatacgatttcatccgcctgctttacgcccgcaccggcgtt
gcccactgctaccggtgcggccggccgattctctcccagagtatcgatgaaatggtcacc
gccgtcatgcagcgaccggaaggtgcccgcctgctggtgcttgcccccctgcatcacgat
ccatcttccggccacaagggattgttcaagcggctgcgcaaggagggcttcgcccgcatc
cgcatggacggcaaaatttatgatctcgagagcctgggcgacgctgccggcatccatccc
cagcagatcgatgtggtcgttgaccgcctgatcctgaaatccacgattcgcaaccggctg
gcggactccatggaactggccatcggcagatccgaagggcaggtggcagtggcgttcgtg
ggagaacgcatggacagcgtggaggagaccctgcggttcagcgaaacggcggcctgtctc
cgctgcggcatcagctatccggagttatcgccgtccagcttttccttcaactcaccccac
ggcgcctgccctcactgcgacggtttgggaatcgtcagggcgttttcccccgctcgaatc
gttcccaatccggagctttccctgagggagggcgcggtggccgtctgggcccagcgccat
tccgtcgccttcgccgaatttctggaggatctgaccaccttttacggggtggacatctat
accccctaccaggatcttcccgaccacttcagatcggtgcttatgcacggttccggagac
caaaagatcccatttggttccgccggccacgctacaaaaacgcccaaaccgtttgaaggc
attctcgcccaactgagccggcaatatgccgaggccggctcaaccgcagaaaaaaacgcc
ctggctgaatatatggccgaggatgcctgcccgcattgccacggttcacgcctgcgccgg
gaaagccggcagataaaaatcgacggcatccccatctttgagttgaccgcacggtcgatc
agcgacctgctgcgtttcttcaaagcccaccatccggatggcaaacgccggttgatcgcc
gagaaaatcgtcaaggagattgtcgcccgtctggcgtttctggaagatgtggggctgggc
tacctgaccctcgaccggccggcccatacgctctccggcggagagagccagcgcatccgc
ctggccacccagatcggcgccaaactgaccggcgttctctatgtgctggacgagcccagc
atcggtctgcatcaacgcgataacagccgactgctgggcacgttgacccgcatgcgcgac
atgggcaactcggtattggtggtggagcatgacgaggagaccattcttgccgccgatcat
gtggtggacatgggccccggcgccggaatgaagggcggccatgtggtcttccagggcacc
cccgcccagttgctgggcgatgcccattcactgaccggcaggtatctttccggacggctg
cgcattgatctgccggaacgccgccggcccgccgaccagggatccatccgcatcaccggt
gcctgccagaacaacctgaaaaacatcgacgtgaccttccccctgggggtactaacctgc
gtcaccggggtttccgggtcgggcaagtccaccctggtcatcgaaaccctttaccgggcc
gcccgacggcgtctgcagcaactcaacctgtccgccggtcacttcggggccattgccggg
cttgaacgggtcgataagatcatcgacatcgaccagtctcccattggcaaaaccccacgc
tccaacccgggaacctatacgggtctgctggcaccgatccgcgatctgttcagccgtacc
ccggaggcccgcatgcgcgggtataaaccgggccgcttcagcttcaacatgcgtgggggg
cgttgtgaagcctgcggtggcgacggtattatccgcatcgagatgcattttctgcccgac
gtctatgtcccctgcgatgtgtgccggggcaaacgctataaccgggagacactggaaatc
cgatacaagggcagaaacatcgccgaggtgctggccatgacggtcaatcaggggctggcc
atgttccagaatgtcgaggccatccgcaccaagctccaaaccctggccgatgtggggttg
ggctatgttcccatcggccagtcggccaccacgctgtccggcggggaggcccaacgcatt
aaactggcccgtgaactcagtcgccgcagcaccggtaatacactgtatattctcgacgaa
cccaccaccggcctgcaccccgacgatatccgcaaattgctgggtgtgctcggccgcctg
gtggatgccggtaatacggtggtgattatcgaacacaacctggacgtcatcaaaacggcc
gatcacgtcatcgaccttggaccggagggaggagacggtggcggattcatcgtggcgacg
ggcacccctgaggatatctgccaggtcgaagattcccacacgggccgctaccttaaaaag
gttctgggaaaccgcctgccgtcatga
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