Devosia oryziradicis: JI749_00395
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Entry
JI749_00395 CDS
T09885
Name
(GenBank) ATP-dependent RecD-like DNA helicase
Organism
doy
Devosia oryziradicis
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA_30
AAA_19
UvrD_C_2
Viral_helicase1
AAA_11
AAA_22
PIF1
nSTAND1
AAA_16
PhoH
UvrD_C
SH3_13
Motif
Other DBs
NCBI-ProteinID:
QQR36140
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Position
83629..87321
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AA seq
1230 aa
AA seq
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MVFHLTMRVAWHGARWNGRVCPAPSSNAFCVALDRIREEKDDAAQDALAGRPWHELTPEE
LPPCKAESGAFMNDTEWTRRFEHPYASIKKATATHGHLKPTVVKVPPFAAFAVPFGWMLR
SEQAAIDAKLPKPLPPDEQSPFSSPWVFGRARQTAIVDHVFDRLTPERSLVFFYCKEGQP
LGDTISRLVVGVGRIQSIAPVKQYDAPAGKDAYPMWDRLLRHSIRPDGFDGFLLPYHDYL
EPTGDDVEDARRARLLAEIAVPADPAHMRAFSYAAELAPADIALSTLIRCLEAVRKIRAH
GIAQGPWERREEWLNTQIGLAWKDRGAFPGLGSALEALGMRLGTALTLELLASGAVATDA
DPWPHVDALLRGKMKPPQPAYDADLKAVRDTWLNLADERRLLLKLLSRFALTPAQASRWF
DPSKRAAASTASTSDAETIANPYRISEVDLGDAKESPVSVGTIDRGLLPEATIAANHPVP
HPSRVESAADPRRLRAALVAVLRRASDTGDALLSVTEAVEKVAALELAHPCLIGVDWPST
NSAALAGVVELIDMPAPEGQQTGISAVQLTELKTREDKLRSVLSKRAGKAAPVVMADWKK
LLMEAVKAAGGAFDPKNARHVLAIDEQATALARVTSRRLTALVGRAGTGKTSVMGALLLN
DALARDGILLLAPTGKARVRLGKAANAEAMTVAQFLNELGRYDRVRQRPRFHGKEKYRKE
RTVVIDECSMLTMDDLAAVLDALDLAHVQRLILVGDPNQLPPIGVGRPFADLTSYLETTD
AKSDTGLALGEALARLTVEVRAVAGADQASDTLRLASWFTRETQPVDADRVLSDLETGRP
FNDLDLFFWTTPDELRSRLSEAFQKHLGLAQAGDVTSFNASLGIDERGWVPFDEPGGSEQ
WQILSPVRMHAHGVHDLNRWAQRRYRARELNAAAEPWVVSLGDESIVIRDKVIQVSNQWR
DAYDGHESGDHYVANGEVGLVGNGKAPWLNVVFAGRPNLRFGYSGRDFPGGSGPLELAYA
ITVHKSQGSEFQKVFVVLPKNCRPLSRELLYTALTRSRRQLVLLIEGDNPSVLFDYTRPE
RSETARRNTNLFLGALRRVETEVPYAENLIHRTEKGHLVRSKSELVIANMLHRSGVEYEY
ERVLDGEVQPGHLRPDFSFVTTDGDLILWEHLGMMGREDYRKGWEWKRAWYEANGFILGQ
TLFSSEDDERGGLDSARLQQVVNSIRELLD
NT seq
3693 nt
NT seq
+upstream
nt +downstream
nt
atggtgtttcatcttacgatgcgtgtggcatggcatggtgcgcgttggaacgggcgggtt
tgcccggctccgtcttcgaatgcgttttgcgtcgctctcgaccgaatccgcgaggagaag
gacgacgccgctcaggacgcgctggcgggccggccatggcatgagctgacgccggaagag
ctgccaccttgcaaggcggaatcgggcgccttcatgaacgacacggaatggacccgccgc
ttcgagcacccttacgcgtccatcaagaaagcaacggcgactcatggtcatctgaagcca
actgtcgtgaaggttccgccttttgcggcttttgcggtcccgttcggttggatgttgcgc
agcgagcaagccgcgattgatgcgaagctgccaaagcctttgccgcctgacgaacaatcg
ccgttctctagtccatgggtcttcggccgggcccgtcagacggcgatcgtcgaccatgtg
ttcgaccgccttacgccggagcgttcgctggtcttcttctactgcaaagagggccaaccg
ctgggcgatactatctcgcgcctagtggtcggtgtcggtcgtattcagtccattgcccca
gtaaagcaatatgacgcgcccgccggcaaggacgcctatccgatgtgggatcgtctgctc
cggcattcgatccgcccggacggcttcgacgggtttctgttgccgtatcacgactatctc
gaaccgacgggcgacgacgtcgaggatgcgcgccgggcgaggctcctggccgaaatcgcc
gtcccagccgacccagctcacatgagggcgttctcctacgccgcggaactcgcgcctgca
gacatcgcgctctcgacgctgatccgttgcctcgaggcggtccggaagatccgcgcccat
gggatcgcacaaggaccgtgggaaaggcgtgaggaatggctcaacacgcagatcgggctc
gcctggaaagaccggggggctttcccaggcctgggctccgccctggaagctttgggcatg
cggctggggacggcgctgacacttgagctgcttgcctcgggtgcggtagcgaccgatgcg
gatccttggccccacgtcgatgcgctgctccgtggtaaaatgaaaccgccgcaacccgcc
tacgacgccgatctcaaggccgtgcgcgacacctggctcaatctagcggatgaacggcgg
ctgctcttgaagctgctctcacgcttcgctctcacgccggcacaagcgagccgctggttc
gatccctcaaagcgggcggcggcgagcacggcttccacgagtgacgccgagaccatcgcg
aacccctaccggatcagcgaggttgacctaggggacgcgaaggagtcgccagtctcggtt
ggaacgatcgaccgcggcctgcttcctgaagcaacgatcgccgccaatcacccggtcccc
cacccgtcgcgcgtagagtccgcggccgatccacgtcgcctgcgagcggcgctcgtcgcc
gtgctgcgacgcgcgtcggataccggtgacgcactgctgagcgtcacggaggccgtcgaa
aaggttgccgcgctcgagctggcccacccctgcttgatcggtgtggattggcccagcacc
aactcggcggcgctggctggtgttgttgagctcattgacatgccggcgcctgagggtcag
cagactgggatttctgcggttcaacttactgagctgaagacgcgcgaggataaactgcgc
tccgtcctctcgaaacgcgcggggaaggccgcccctgtggtgatggccgattggaagaag
ctcctgatggaagcggttaaggcggccggcggcgcgttcgatcccaagaacgcacggcac
gttctcgccatcgacgagcaagcgactgcactcgcccgcgtgacctcacgtcgcctgacc
gcgctcgtcgggcgggctggcaccggcaagacgtccgtcatgggggcgctcttgctcaac
gacgcgctcgcccgcgatggcattctgctgctcgccccaaccggcaaggcacgcgtcagg
ctcggaaaggcggccaacgccgaggcgatgaccgtcgcccagttcttgaacgagcttgga
cggtacgaccgtgtccgtcagaggccgcgcttccatggcaaggagaagtaccgaaaggaa
aggacggttgtcattgacgagtgctcgatgctcaccatggacgatcttgctgccgtgctg
gacgcgctcgaccttgcccatgtccagcggctcattctcgtgggcgatcccaaccagctg
ccgccaatcggggtcggacgtccgttcgccgacctgacgtcctatctggagactacggat
gcaaagagcgacaccggcctggcgctcggcgaggcattggctcgattgacggtcgaggtc
cgcgccgtcgcgggcgcggaccaagcatcggatacgctccggctcgcctcctggttcacg
agagagacgcagcccgtggacgccgaccgtgttctcagcgatttagaaacggggcggccc
ttcaatgacctggacctgttcttctggacgacgcccgacgagctgcgtagccgcttgagt
gaggccttccagaagcatctcggccttgcgcaggctggcgacgtcaccagcttcaacgcc
tcactcggcattgacgagcgaggctgggttcccttcgacgagcccggcggctccgagcag
tggcagatcctgtcaccggttcgcatgcacgcccacggcgtgcacgacctgaaccgctgg
gcgcagcgtcgctatcgcgcacgggagctcaacgcagctgccgagccgtgggtggtcagt
ctaggcgacgaaagcatcgtcattcgggacaaggtcatccaggtctcaaaccagtggcgc
gatgcctatgacgggcacgagtcgggtgaccactacgtagccaacggcgaggtcgggctc
gtcggtaatggaaaagccccatggttgaacgtggtcttcgccggccgtcccaacctgcgt
tttggttacagcggccgcgactttccaggcggatctgggccgctcgagctcgcgtatgcg
atcaccgtgcataagtcgcagggcagcgagttccagaaggtgtttgtcgtcctgcccaag
aactgccggcctctttcacgcgagctactctacacggccctgacccggtcgcgccgccag
ctcgtgctactaattgagggagacaacccgtcggtgttgttcgactacacccggcccgag
cggtcagagaccgcgcggcggaacaccaacctcttcctaggcgcactccggcgagtcgag
accgaggttccgtatgccgaaaatctgatccatcgtacggagaagggtcacttggtccgc
agcaaatcggagctggtgatcgcgaacatgctacaccggtcaggtgtggaatacgagtac
gaacgcgtacttgatggggaggtccaacccggccacctccgtccagacttttcattcgtc
actacagacggcgacctgatcctctgggaacacctcggcatgatgggtcgtgaggactac
cggaaggggtgggagtggaagcgggcgtggtatgaagcgaacgggttcatcttggggcag
acgctgttctcgtcggaagatgatgaacgcggcgggcttgactccgctcggctgcagcaa
gttgtcaattcgatacgcgagctcctcgattag
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