Devosia oryziradicis: JI749_01805
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Entry
JI749_01805 CDS
T09885
Symbol
addA
Name
(GenBank) double-strand break repair helicase AddA
KO
K16898
ATP-dependent helicase/nuclease subunit A [EC:
5.6.2.4
3.1.-.-]
Organism
doy
Devosia oryziradicis
Brite
KEGG Orthology (KO) [BR:
doy00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
doy03400
]
JI749_01805 (addA)
Enzymes [BR:
doy01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
JI749_01805 (addA)
DNA repair and recombination proteins [BR:
doy03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
AddAB pathway proteins
JI749_01805 (addA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
PDDEXK_1
UvrD_C_2
AAA_12
DEAD
AAA_30
Motif
Other DBs
NCBI-ProteinID:
QQR36399
UniProt:
A0ABX7BZG5
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All DBs
Position
373287..376718
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AA seq
1143 aa
AA seq
DB search
MSDRGKLVIPSTTRRYQATAADPRRSIWVGANAGSGKTFVLTQRVLRLLLTGVNPQSILC
LTYTKAAAAEMRARVAKSLAEWAVMPQVELAKTLREIEGSRVDDALVERARTLFARALET
PGGLKIVTIHAFCESVLHRFPLEAGVPFDFEVIEDDERATLIRAAREAVLAEGLRGAAGA
SAVETLFDRLSNFQIEEAIDIALSDTRRLKAVLSDTSAAKARLRALVGVGNTDSATLRRQ
LSSDSRLSADLLREIVRIFGGVPGGRRFVDLLAKIDPSRMGGQQLRTAFVTNEGKPRALL
NATQKGQRPDLQVLLEAEQDRIVAIIDAIGRAELVERSDALLDVVAAIVGRYEAGKRARS
RLDFDDLVERLGTLFERPEAGAWVRYKLDSGIDHILVDESQDTNPEQWRVVRAIGDEFFA
NAAGATRPRSLFAVGDQKQSIYSFQGAEPILFDETGRAFAKAAQAAGMPFERVPLHTSFR
TLPEILAAVDLVAGLPDMPAALLETEPVIHEAARLQVGGKVTLWPPIQQAAAPTGLGAWP
TEPASGGVEQTAARQVAGRIAREIRGWIDGKRPLASRGRTIEPKDVMVLVQSRGAVFQEV
IRALRRENLPTPGADRLDVATHIAVLDLLALCDVLLNPADDLQLAALLRSPLFDISENDL
YALAQPRGQYQTLWDALKETALPQGRDAHARLARWRKELDFERPFEFLSQVLYADGGLRR
FHGRLGEEVDDVLAELMELALKHEQSEQPSLQGFVAAMRQTEISIKRELSETGNGVRVMT
VHGAKGLEAPIVILADAASKPQGRLVNKPVYVLDRAPGPLLVHASGRSQHTPDSVPVRDA
VEAALLQEYWRKLYVAMTRAEDELYVTGALTQIGKIDGTWYEKIDMALRPQAERVASEAG
EEIELIYPAERPQPQPVGKLTPSAAMRPSPLVLGSVPAPIRPAILTPSTVGTHGRRHGAL
DTAAEQLRDADAARREGIALHALLQHLPRFPAAARMETARAALTVLLPEDAAGHAGIAAR
AVSILSRDELTTLFGPDSRAEVPFLVDMIRDGEDIRLAGRIDRLVIDDSGVLVVDYKSDA
SVPGGPGDVPGNYLTQLGLYALVAGQLFPGRTVRAAILWTRLESLMFLPPDVLAAGTRGF
TMR
NT seq
3432 nt
NT seq
+upstream
nt +downstream
nt
gtgagcgatcgcggcaagctcgtcatcccctcgaccacccggcgctaccaggcgacggcg
gccgatccgcgccgctcgatttgggtgggcgccaatgccggctcgggcaagaccttcgtg
ctgacccagcgcgtgctgcgcctgctgctgaccggggtcaatccgcagtcgatcctctgc
ctgacctataccaaggcggccgccgcagagatgcgggcccgtgttgcaaagagcctcgca
gaatgggcggtgatgccgcaggtcgagctggccaagaccctgcgggagatcgaaggcagc
cgcgtcgacgacgcgctggtcgagcgagcgcgcacactgtttgcccgggcgctcgaaacc
cccggcgggctcaagatcgtcacgatccacgccttctgcgagtcggtgttgcaccgcttt
ccgctcgaagccggcgtgccgttcgacttcgaggtgatcgaggatgacgagcgcgccacg
ctcatccgggcggcccgcgaggcggtgctggccgaaggcctgcgcggcgctgccggggcg
tcggcggtcgagacgctgttcgaccggctgagcaatttccagatcgaggaagcgatcgat
atcgccctcagcgacacccgccgcctcaaggcggtgctatcggacaccagcgccgccaag
gcgcggctgcgggcgctggtcggggtcggcaacaccgattccgccaccttgcgccggcag
ctgtcgagcgacagccggctatcggcggacctgctgcgagagatcgtccgcatctttggc
ggcgtgccgggcgggcggcgcttcgttgacctcctcgccaagatcgacccgagccgcatg
ggtggccaacagctgcgcacggccttcgtcaccaatgagggcaagccgcgcgccctgctc
aacgccacgcagaaagggcagcggccagacctgcaggtcctgctcgaagccgaacaggac
cgcatcgtcgccattatcgatgccatcggccgggccgaattggtggagcgcagcgacgcg
ctgctcgacgtggtggctgccattgtggggcgctacgaggccggcaagcgggctcgttca
cggctcgacttcgacgatctggtcgagcgactgggtacgctgttcgaacgacccgaggcc
ggcgcctgggtgcgctacaagctcgattcgggcatcgaccatatcctggtcgatgaaagc
caggacaccaacccggaacaatggcgggtggtgcgggccatcggcgacgagttctttgcc
aatgcagccggcgccacccggccgcgctcgctgttcgcggtgggcgaccagaagcagtcg
atctattccttccagggcgccgaacccattctgttcgatgagaccggccgcgcctttgcc
aaggccgcccaggcggccggcatgccgttcgagcgcgtgccgctgcataccagcttccgc
accctgcccgaaatcctggccgcggtggacctggtggcgggcctgccggacatgccggcg
gccttgctggaaaccgagcctgtgatccacgaggcagcccgcttgcaggttggcggcaag
gtcacgctatggccgccgatccaacaggctgcggcccccaccggtctcggcgcctggcca
accgaaccggcctcgggcggcgtcgagcagacagcggcccgccaggtggcggggaggatt
gcgcgcgaaatccgcggctggatcgacggtaagcggccgctggccagccgtggccgcacc
atcgagccgaaagacgtcatggtgctggtgcaatcgcgcggcgcggtgttccaggaagtc
atccgcgccctgcgcagggagaacctgccgacgcccggcgccgaccggctcgatgtcgcc
actcatattgcggtgctcgacctcttggcgctgtgcgatgtgctgcttaatccggccgat
gacctgcaactggcggctttgctgcgctcgcccttgttcgatatcagcgagaacgatctc
tacgcgctggcccagccgcgcggccagtaccagacgctatgggatgcgctgaaagaaacc
gcgctgccgcaggggcgcgacgcccacgcccggctggcgcgctggcgcaaggagctcgat
ttcgagcgtcccttcgaattcctcagccaggtgctctatgccgatggcgggctgcgccgc
ttccatggccggctcggcgaggaagtcgacgacgtgctggccgagttgatggagctggcg
ctcaagcacgaacagagcgaacagccctcgttgcagggcttcgtcgccgccatgcggcag
accgaaatctcgatcaagcgcgagctgagcgagaccggcaacggcgtgcgggtgatgacg
gtgcatggcgccaaggggctggaagcgcccatcgtcattcttgccgacgccgccagcaag
ccgcagggacggctggtcaataaacccgtctatgtgctcgaccgcgcgcccggacccctg
ctggtgcatgcctcgggccggtcgcagcatacgccagatagcgtgccggtccgcgacgcg
gtggaggccgcgttgctgcaggaatattggcgcaagctctatgtcgccatgacccgtgcc
gaggacgagctttatgtcaccggcgcgctgacccagatcggcaagatcgacggcacctgg
tacgaaaagatcgacatggccctgcgtccacaggccgagcgggtcgccagcgaggccggc
gaggaaatcgagctcatctatccggccgagcggccacagccgcagccggtagggaagctg
acgccatcggcggccatgcgcccgtctccattggtgctcggttccgtgcccgcgccgatc
cgccccgccatcctgaccccatcgaccgtcggcacgcatggccggcgccacggagcgctc
gacacggcggcggagcagttgcgcgatgccgatgcggcccggcgcgaggggatcgcgctc
catgccttgttgcagcatctgccgcgtttccccgcggcggcccggatggaaacggccagg
gcggcgctcacggtgctgctgcccgaggacgcagcgggccatgccggcattgcggccagg
gccgtctccatcctgtcccgtgacgagctgacgaccctgttcggccccgacagccgggcc
gaggtgccgttcctggtcgacatgatcagggatggggaagatattcgcctggcgggccgt
atcgaccggctggtcattgacgactcgggggtgttggtggtggactacaagtccgacgca
tcggtgcccggggggccgggcgatgtgccggggaactatcttacccagctcggattatat
gcgttggttgcaggtcagcttttccccggacgaaccgtgcgtgcggcaattttgtggaca
cgactggaatcattgatgtttctgccgccggatgtcctggcggcgggcacaaggggcttc
accatgcggtga
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