Devosia oryziradicis: JI749_01975
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Entry
JI749_01975 CDS
T09885
Name
(GenBank) PBP1A family penicillin-binding protein
KO
K05366
penicillin-binding protein 1A [EC:
2.4.99.28
3.4.16.4
]
Organism
doy
Devosia oryziradicis
Pathway
doy00550
Peptidoglycan biosynthesis
doy01100
Metabolic pathways
doy01501
beta-Lactam resistance
Brite
KEGG Orthology (KO) [BR:
doy00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00550 Peptidoglycan biosynthesis
JI749_01975
09160 Human Diseases
09175 Drug resistance: antimicrobial
01501 beta-Lactam resistance
JI749_01975
09180 Brite Hierarchies
09181 Protein families: metabolism
01003 Glycosyltransferases [BR:
doy01003
]
JI749_01975
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
doy01011
]
JI749_01975
Enzymes [BR:
doy01000
]
2. Transferases
2.4 Glycosyltransferases
2.4.99 Transferring other glycosyl groups
2.4.99.28 peptidoglycan glycosyltransferase
JI749_01975
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.16 Serine-type carboxypeptidases
3.4.16.4 serine-type D-Ala-D-Ala carboxypeptidase
JI749_01975
Glycosyltransferases [BR:
doy01003
]
Polysaccharide
Bacterial polysaccharide (excluding LPS)
JI749_01975
Peptidoglycan biosynthesis and degradation proteins [BR:
doy01011
]
Peptidoglycan biosynthesis and degradation
Glycosyltransferase/DD-Transpeptidase (Class A PBP)
JI749_01975
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Transgly
Transpeptidase
Motif
Other DBs
NCBI-ProteinID:
QQR36429
LinkDB
All DBs
Position
complement(407876..410542)
Genome browser
AA seq
888 aa
AA seq
DB search
MDFRITADDRVGNQPGKGSKLQPAARGGKGQRVEPTLGQSMPFSVSDERVGSGGSGGGGK
PPKAPRRGKAKPVRKKRSRSGGFLMGLLWWSFVACLWGGIAVIGVIVYYGAQLPSSNTWA
IPDRPPNIRILAADGSLISNRGATGGEAITYRELPYYVPAAIIASEDRRFMQHFGVDPLG
LISVAIESVQARGVTRGASTITQQVAKNLFLTPDQTLGRKVQEAILAVWLEQNYTKEEIL
ELYMNRVYFGAGATGIEAAAQTYFGVSARNLSLGQAAMLAGILPAPSAYNPKTNPERAIE
RQRLSLAAMARDGFITEEEAAAAQIDPSQTVRTRVAGSEDYVADWVESLMTAYIGEIEDD
VVVQTTIDFKMQKDAEFIVKELVASEGPKRGFSQGALVAMDVDGTVRAMVGGVDYQASQY
NRAVTAKRQPGSTFKPFVYMAAMEKGYTPDTLAEDAQFTYNGWSPRNASGKYAGTVTLRQ
GLAYSLNTIAARLAIDVTPEAVIEVATRMGISSPLTPVPSIALGTQEVNLLELTSAYAPF
ANGGFGVIPNVITSITSKDGTSLYQASDAGPGRVVAPNILAEMNDMLETAVEVGTGKGAN
LGGWEFGGKTGTSQSARDALFVGYTAAMVTGVWLGNDDDTKTTLSGGNVPAAIWSEFMTK
AHAGKQVAQIPGGSYDGQLVAQPVVDPATGQAVIDPATGQPMTQYVDAGTGAPVQTMTDP
ATGQLMQLDPATGQYVPATAAQSAQQPIQTGQMIDPATGAVVGAQLDPATGMPVNNTGGM
LVDANGVQIDPATGMPVGQVVGTQPQAIDPVTGFPLQQQTNGVGQAPIDPNTGLPMVLVV
DPATGQQVWVPSAPAQPQPPAAVGQQQVYQEPERQRTLMDLIFGDQQN
NT seq
2667 nt
NT seq
+upstream
nt +downstream
nt
atggattttcgcattaccgccgatgaccgcgttggcaatcagccaggcaagggcagcaag
ctccagcctgcggcccgtggcggcaagggacagcgcgtggagcccaccctgggacagtcc
atgcctttctcggtgagcgatgaacgcgtcggtagcggcggttcgggcggtggcggcaag
ccgcccaaggccccgcgtcgcggcaaggccaagccggtccgcaagaaacgctcgcgcagc
ggtggcttcctcatgggcctgctatggtggagcttcgtcgcctgcctctggggcggcatc
gcggtgatcggcgtcatcgtctactacggcgcccagctcccctcgtccaacacctgggcc
attccggatcgcccgccaaatatccgcatcctggcggccgatggcagcctgatctccaac
cgcggcgccacgggcggcgaggccattacctatcgcgaattgccctattatgtgccggcc
gccatcatcgccagcgaagaccgccgcttcatgcagcatttcggcgtcgatccgctcggc
ctgatttctgtggccatagagtcggtgcaggcgcgcggcgtgacccgcggcgcctcgacc
atcacccagcaggtggccaagaacctgttcctcacgcccgaccagaccctgggccgcaag
gtgcaggaggccattctcgcggtgtggctggagcagaactacaccaaggaagaaatcctc
gaactctatatgaaccgcgtctatttcggcgccggtgcaacgggtatcgaggcggcggcg
cagacctatttcggcgtttcggcccgcaacctgtcgctgggccaggcggccatgctggcc
ggcatcctgcccgcgccctccgcctacaatcccaagaccaacccggaacgcgccatcgag
cgccagcgcctgtcgctggctgccatggcccgcgatggcttcattaccgaggaagaggcc
gcggcggcccagatcgatcccagccagaccgtgcgcactcgcgtggccggctcggaagac
tatgtcgccgattgggtggaaagcctgatgacggcctatatcggcgagatcgaggacgac
gtggtggtccagaccaccatcgacttcaagatgcagaaggatgccgagttcatcgtcaag
gaactggtcgcctccgaaggccccaagcgtggtttcagccagggcgccctggttgccatg
gatgtcgatggcacggttcgcgccatggtcggcggcgtcgactaccaggccagccaatat
aatcgtgccgtcacggccaagcggcagcccggctccaccttcaagcccttcgtctacatg
gccgccatggaaaagggctatacgcccgataccctggccgaggatgcccagtttacctat
aacggctggagcccgcgcaatgcctcgggcaagtatgccggcaccgtgaccctgcgccag
ggcctggcctattcgctcaacaccattgccgcacgcctggccatcgacgtcacgccagag
gcggtgatcgaagtggcgacccgcatgggtatttcctcgccgctcacccccgtgccctcc
atcgccctgggcacgcaggaagtgaacctgctcgagctgaccagcgcctatgcgcccttt
gccaatggcggtttcggcgtcatccccaatgtgattacctcgatcacgtcaaaggatggc
acctcgctctaccaggcctccgatgcgggccccggccgcgttgtcgctcccaatatcctg
gccgagatgaacgacatgctcgaaaccgccgtcgaggtgggtacgggcaagggcgccaat
ctggggggctgggaattcggcggcaagacgggcacgtcccagagcgcgcgcgacgccctg
tttgtcggctacaccgccgccatggtcaccggcgtctggctgggcaatgacgatgatacc
aagaccacgctgtcgggcggcaacgtgccggcagccatctggtccgaattcatgaccaag
gcccatgccggcaagcaggtcgcccagatcccgggcggcagctatgatggccagctcgtg
gcccagccggtcgtcgaccccgccaccgggcaggccgtcatcgatccggccaccggccag
ccgatgacccagtatgtcgatgccggtacgggcgcccccgtccagaccatgaccgatccg
gcgaccggccaactcatgcagctcgatccggccaccggccagtatgtcccggccacggcc
gcccagtccgcccagcagcccatccagactggccagatgatcgatccggcgaccggcgcc
gtcgtcggcgcgcagctcgatccggccaccggcatgccggtcaacaataccggcggcatg
ctggtcgatgccaatggcgtccagatcgacccggctaccggcatgccggtcgggcaggtc
gtcgggacgcagccgcaggcgatcgacccggtgacgggcttcccgctgcagcagcagacc
aatggcgtcggccaggcgccgatcgaccccaataccggcctgcccatggtcctggtggtc
gatccggccaccggccagcaggtctgggtgcccagcgccccagcccagccgcagccgccg
gccgctgtcggccagcagcaggtctaccaggagccggaacgccagcgtacgctgatggac
ctgatcttcggcgaccagcagaactga
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