Devosia oryziradicis: JI749_02340
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Entry
JI749_02340 CDS
T09885
Name
(GenBank) class I SAM-dependent RNA methyltransferase
KO
K03215
23S rRNA (uracil1939-C5)-methyltransferase [EC:
2.1.1.190
]
Organism
doy
Devosia oryziradicis
Brite
KEGG Orthology (KO) [BR:
doy00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
doy03009
]
JI749_02340
Enzymes [BR:
doy01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.190 23S rRNA (uracil1939-C5)-methyltransferase
JI749_02340
Ribosome biogenesis [BR:
doy03009
]
Prokaryotic type
rRNA modification factors
23S rRNA modification factors
JI749_02340
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA_U5-meth_tr
TRAM
MTS
TRM5-TYW2_MTfase
Methyltransf_25
Motif
Other DBs
NCBI-ProteinID:
QQR36497
LinkDB
All DBs
Position
complement(475709..476902)
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AA seq
397 aa
AA seq
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MPTTTTITSLGHKGEGVAEIDGRKVFVPLALPGEVVEIEADGERGTLLRVINPAPGRIAP
FCPHFGACGGCQLQHMDRASYEAFKIGLVETPLRFAGIEQRVTRFIDAAGDGRRRATLHA
RHEGAGYMRLRSHQVHDIDACPILVPGLARAPDIARSLMQAIGEADVSFTATLTGLDVAV
RTEKKQARADRLAPLAGRFKLARLALNGEMVLQAQAPVIEMGRARVELPIGSFLQATEAA
EAALADYVLGAVGKARTVADLFCGIGPFALRLAEQRPVIAFDSDKPAVAALDKAWRFAKG
IREVTARPRDLFRDPLTQFELNYEAVVLDPPRAGAEAQVRELAKSKVKTIVMVACDARTF
ARDAAILVAGGYGVGEIVAVDQFTQSAHVEIAATFRR
NT seq
1194 nt
NT seq
+upstream
nt +downstream
nt
atgccaaccaccaccaccatcaccagcctcggccacaagggcgagggcgttgccgagatc
gatggccgcaaggtcttcgtgcccctggcgctgccgggcgaggtcgtggaaatcgaggcc
gatggcgagcgcggcacgcttttgcgggtcatcaacccggcgcccggtcgcatcgcgccc
ttctgtccccattttggcgcctgcggcggctgccagttgcagcacatggatcgggccagc
tacgaggccttcaagatcggtctggtggaaacgccattgcgttttgccggcatcgaacag
cgggtgacacgcttcatcgatgccgccggcgatggccgccgtcgcgccaccctccatgcg
cgccatgagggcgccggttacatgcggctgcgcagccaccaggtgcacgatatcgatgcc
tgccccattctggtacccggtctcgcccgggcgcccgacatcgcccgatcgctcatgcag
gcgatcggggaagccgatgtgagctttactgcgaccctgaccggtctcgatgtcgccgtg
cgcaccgaaaagaagcaggcgcgcgctgaccgcctggcgccactggccggtcggttcaag
ctggcgcgactggccctcaacggcgaaatggtgctgcaggcccaggcgcccgtcatcgaa
atgggccgcgcccgggtggaattgccgatcggcagctttctccaggccaccgaagcagcc
gaggcggcgctggccgattatgttctgggcgcggtgggcaaggccaggacggttgccgat
ctcttctgcggcatcggccccttcgcgctccggctggccgagcaaaggcctgtcatcgcc
ttcgacagcgataaaccggcggttgcggccctcgacaaggcatggcgcttcgccaagggc
atccgcgaggtgacggcgaggccccgcgacctcttccgcgatccgctgacgcaattcgaa
ctcaattacgaggccgtggtgctcgatccgccgcgcgccggggccgaggcgcaggtccgc
gaactggccaaatccaaggtcaagaccatcgtcatggtcgcctgcgacgcacgcactttc
gcccgcgatgcggccatcctggtggcgggtggttatggcgtgggcgaaattgtcgcagtc
gatcaattcacccaatctgcccatgtcgaaattgctgccacatttcgccggtag
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