Devosia oryziradicis: JI749_02405
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Entry
JI749_02405 CDS
T09885
Symbol
nusA
Name
(GenBank) transcription termination/antitermination protein NusA
KO
K02600
transcription termination/antitermination protein NusA
Organism
doy
Devosia oryziradicis
Brite
KEGG Orthology (KO) [BR:
doy00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
doy03021
]
JI749_02405 (nusA)
03009 Ribosome biogenesis [BR:
doy03009
]
JI749_02405 (nusA)
Transcription machinery [BR:
doy03021
]
Prokaryotic type
Bacterial type
Other transcription-related factors
RNA polymerase-associated proteins
JI749_02405 (nusA)
Ribosome biogenesis [BR:
doy03009
]
Prokaryotic type
rRNA transcription factors
JI749_02405 (nusA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
NusA_N
KH_5
HHH_5
S1
KH_2
KH_NusA_C
DUF4332
KH_1
HHH_2
Ribosomal_S17e
Motif
Other DBs
NCBI-ProteinID:
QQR36508
LinkDB
All DBs
Position
487614..489212
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AA seq
532 aa
AA seq
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MAVSANRLELLQIADAVAREKSIDRMVVIEAMQDAMEKAAKGRYGAETEIKVEINPRSGE
TRMWRLLEIVEDVEEPSRQIDLKRAQAKSPEAKIGDFLTEPLPPMEFGRIAAQSAKQVIV
QKVRDAERERMYDEYFNRIGEIVNGTVKRVEYGNVIVDLGRGEAIIRRDELIPREMFRYG
DRVRAYVYDVRREQRGPQIFLSRTHPQFMAKLFMQEVPEIYDGVITIRSIARDPGSRAKI
AVTSSDSSIDPVGACVGMRGSRVQAVVAELQGEKIDIIPWTDTIADLVVSALQPADVAKV
VLDEQAERIEVVVPDEQLSLAIGRRGQNVRLASQLIGWDIDILTEQEESERRQKEFTERS
SLFMAALDVDEMVAQLLASEGFSSVEELAYIDANEIASIDGFDEETAGEIQNRATEYLAA
IDRAHDEERKKLGVDDDLYEIAGLNAAMLVALGKDGVKTVEDFAGCAADDLIGWSERKDG
ETKRFEGTFKDFPISREEAEDMIMQARIKAGWIDEADVAATDEEAASEEASA
NT seq
1599 nt
NT seq
+upstream
nt +downstream
nt
atggccgttagcgcgaaccgtctcgagctgctgcagatcgcagatgccgttgcccgcgaa
aagtcgatcgaccgcatggtcgtgatcgaggcgatgcaggacgccatggaaaaggcggcc
aagggccgctacggcgccgagaccgagatcaaggtcgagatcaacccgcgctcgggcgaa
acccgcatgtggcgcctgctcgagatcgtcgaggatgtcgaggagcccagccgccagatc
gacctcaagcgcgcccaggccaagtcgccggaagccaagatcggcgatttcctcaccgaa
ccgctgccgcccatggaattcggccgcatcgccgcccagtctgccaagcaggtcatcgtg
cagaaggtgcgcgatgccgagcgcgagcgcatgtatgacgagtacttcaaccgcatcggc
gagatcgtcaacggcaccgtcaagcgcgtcgaatacggcaacgtgatcgtcgacctgggt
cgtggcgaagccatcatccgccgcgacgagctgatcccgcgcgaaatgttccgctatggc
gaccgcgtccgcgcctatgtctatgacgtgcgccgcgaacagcgcggcccgcagatcttc
ctcagccgcacgcatccgcagttcatggccaagctcttcatgcaggaagtgcccgagatc
tacgacggcgtcatcacgatccgctcgatcgcgcgcgatccgggttcgcgtgccaagatc
gccgtgacctcctcggattcgtcgatcgacccggtgggcgcgtgcgtgggtatgcgcggt
tcgcgcgtccaggccgtggttgccgaactgcagggcgaaaagatcgacatcatcccctgg
accgacacgattgccgacctggtggtttcggcgctgcagccggccgatgtcgccaaggtg
gtgctcgacgagcaggcagagcgcatcgaagttgtggtccccgacgagcagctctcgctt
gccatcggccgccgcggccagaatgtgcgcctggcatcgcagctgatcggctgggatatc
gacatcctgaccgagcaggaagagagcgagcgccgccagaaggaattcaccgaacgctcg
agcctgttcatggcagcccttgacgtcgacgagatggttgcccagctattggcttcggaa
ggcttctcctcggtcgaggaactggcctatatcgacgccaacgaaatcgcctcgatcgat
ggcttcgacgaagaaaccgccggcgaaatccagaaccgagccaccgaatacctagcggcg
atcgatcgggcccacgacgaagagcgcaagaagctcggcgtggatgacgacctctacgag
atcgccgggctcaacgccgccatgctggtggccctgggcaaggacggcgtcaagaccgtc
gaagactttgccggctgcgccgcggacgacctgatcggctggagcgagcgcaaggacggc
gagaccaagcggttcgaaggcacgttcaaggacttcccgatttcgcgggaagaggctgaa
gacatgatcatgcaggcgcgcatcaaggccggctggatcgacgaggcagacgtagcggcc
accgatgaggaagccgccagcgaagaggcatcggcctaa
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