Devosia oryziradicis: JI749_02460
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Entry
JI749_02460 CDS
T09885
Symbol
miaB
Name
(GenBank) tRNA (N6-isopentenyl adenosine(37)-C2)-methylthiotransferase MiaB
KO
K06168
tRNA-2-methylthio-N6-dimethylallyladenosine synthase [EC:
2.8.4.3
]
Organism
doy
Devosia oryziradicis
Brite
KEGG Orthology (KO) [BR:
doy00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
doy03016
]
JI749_02460 (miaB)
Enzymes [BR:
doy01000
]
2. Transferases
2.8 Transferring sulfur-containing groups
2.8.4 Transferring alkylthio groups
2.8.4.3 tRNA-2-methylthio-N6-dimethylallyladenosine synthase
JI749_02460 (miaB)
Transfer RNA biogenesis [BR:
doy03016
]
Prokaryotic type
tRNA modification factors
Methylthiotransferases
JI749_02460 (miaB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UPF0004
Radical_SAM
TRAM
Motif
Other DBs
NCBI-ProteinID:
QQR36519
LinkDB
All DBs
Position
500944..502341
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AA seq
465 aa
AA seq
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MTETRANTKKLFIKTYGCQMNVYDSDRMMDALAPHGYETTLDPAQADLVLLNTCHIREKA
SEKVFSELGRLKELQNERRAMGGDMMIGVAGCVAQAEGEEIARRAPVVDMVFGPQAYHKL
PDMLAQAESQRHLHPSLKKAVVDTDFPEEDKFEHLPAARKEVTIKRGLTAFLTVQEGCDK
FCSFCVVPYTRGAEVSRPVAQVIAEARGLVDAGVKELTLLGQNVNAYHGLDATGRPVGLG
ELAYLLAEIPGLERLRYTTSHPRDMDDSLMAAHRDLDILMPYLHLPVQSGSDRILKAMNR
RHTAAEYMAVIDRIKAARPDMALSGDFIVGFPGETDLDFEDTLKIIADVGYASAYSFKYS
TRPGTPGANLPDQVAEEVKTERLYRLQELVNAQTTAFHQSCVGRTLPVLIERPGRQVGQV
GGRSPYLQAVHLEGSTDLIGAIHQVEIIGTSVNSLVGRLKVAVAA
NT seq
1398 nt
NT seq
+upstream
nt +downstream
nt
atgaccgagacgcgcgccaataccaagaagctgttcatcaagacctatgggtgccagatg
aacgtctatgacagcgaccgcatgatggatgcgctggcgccgcacggctatgagaccacg
ctggaccctgcccaggcggacttggtgctgctcaatacctgccacatccgcgagaaggct
tcggaaaaggtgttttccgaactgggccggctcaaggaactgcagaacgagcgccgggcg
atgggcggcgacatgatgatcggggttgccggttgcgtggcgcaggccgagggcgaggaa
atcgcccgccgcgcgccggtggtcgacatggtgttcgggccgcaggcctatcacaagctg
cccgacatgctggcgcaggccgaaagccagcgccacctgcatcccagcctcaagaaagcg
gtcgtcgacaccgacttccccgaagaagacaagttcgagcacctgccggcggccaggaag
gaagtgaccatcaagcgggggctcaccgcctttcttaccgtgcaggaaggctgcgacaag
ttctgcagcttctgcgtggtgccctatacccggggcgccgaagtcagccgcccggtggcg
caggtcatcgccgaggcgcgcgggctggtggacgccggcgtcaaggaactcaccctgctc
ggccagaacgtgaacgcctatcacgggctcgacgccacgggccgccccgttgggctgggg
gaattggcttatctgctggccgaaattccgggcctcgagcgccttcgctatacgaccagc
catccgcgcgacatggacgacagcctgatggccgcccaccgcgacctcgatatcctgatg
ccttacctgcacctgccggtgcaatcgggcagcgaccgcatcctcaaggccatgaaccgg
cgccacaccgcggcggaatacatggccgtgatcgaccgcatcaaggcggcgcggccggac
atggcgctgtcgggcgatttcatcgtcggcttccccggcgagaccgacctggatttcgag
gacacgctcaagatcatcgccgatgtcggctatgcctcggcctattcgttcaaatactcc
acccgccccggtacgcccggcgcgaacctgcccgaccaggtggccgaggaggtcaagacc
gagcggctctaccggctgcaggaactggtcaacgcccagaccaccgcgttccaccaaagc
tgtgtcggcaggaccctgcccgtgctgatcgaacggccaggccgacaggttggccaggtg
ggtgggcggtcgccctatctgcaggccgtgcatctggagggcagcaccgacctgatcggc
gcgatccaccaggtggagattatcggcaccagcgtcaattcgctggtgggccggctcaag
gtggctgtggcggcctaa
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